RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 SMDT1Q9H4I9 107 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 GSN-AS1Q9NRJ2 163 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 BPIFA4PQ86YQ2 179 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 STXBP6Q8NFX7 210 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 Q9H3A6 140 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 GOSR1O95249 250 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 FAM168AQ92567 244 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 PEX7O00628 323 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 FAM209BQ5JX69 171 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ARPC1AQ92747 370 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SERF1AO75920 110 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 LHBP01229 141 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TMEM14BQ9NUH8 114 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 VAMP8Q9BV40 100 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 C1RLQ9NZP8 487 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 COL4A2P08572 1712 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 IGKV2-40A0A087WW87 121 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 IGKV2D-40P01614 121 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 FCER1GP30273 86 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SAA4P35542 130 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ZNF600Q6ZNG1 722 aa11.91□□□□□ -0.5
TNFRSF11A-206ENST00000617039 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TRGV3P03979 118 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 MFAP4P55083 255 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SELENOTP62341 195 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 TEP1Q99973 2627 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 RHOGP84095 191 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 KMT2EQ8IZD2 1858 aa11.9□□□□□ -0.5
TNFRSF11A-206ENST00000617039 F5H697 171 aa11.9□□□□□ -0.51
TNFRSF11A-206ENST00000617039 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.51
TNFRSF11A-206ENST00000617039 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.9□□□□□ -0.51
TNFRSF11A-206ENST00000617039 PARD6GQ9BYG4 376 aaPredicted RBP11.9□□□□□ -0.51
TNFRSF11A-206ENST00000617039 BET1LQ9NYM9 111 aa11.9□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TCRBV4S1A1TA0A5B7 111 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 GUSBP1Q15486 140 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HSBP1L1C9JCN9 74 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 RELQ04864 619 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HIST1H2BLQ99880 126 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 SMIM6P0DI80 62 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TWIST1Q15672 202 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
TNFRSF11A-206ENST00000617039 F2Z2F3 143 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HOXA5P20719 270 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 GATA4P43694 442 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 NDFIP1Q9BT67 221 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 RNF125Q96EQ8 232 aa11.88□□□□□ -0.51
TNFRSF11A-206ENST00000617039 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 VENTXO95231 258 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 H3BUX3 64 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 IL17RELQ6ZVW7 336 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TEX45Q8NA69 505 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 NDUFA4L2Q9NRX3 87 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 DEFB1P60022 68 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 AMBPP02760 352 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 MAS1LP35410 378 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 KCNS1Q96KK3 526 aa11.86□□□□□ -0.51
TNFRSF11A-206ENST00000617039 ATRQ13535 2644 aa11.85□□□□□ -0.51
TNFRSF11A-206ENST00000617039 GCGP01275 180 aa11.85□□□□□ -0.51
TNFRSF11A-206ENST00000617039 TMEM95Q3KNT9 176 aa11.85□□□□□ -0.51
TNFRSF11A-206ENST00000617039 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms