RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 C22orf34Q6ZV56 151 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TEX45Q8NA69 505 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TNFRSF14Q92956 283 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 C11orf52Q96A22 123 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 CITED1Q99966 193 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 C21orf62Q9NYP8 219 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TBL2Q9Y4P3 447 aaKnown RBP4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TRBV9A0A0B4J1U6 114 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 ECSCRQ19T08 205 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 NRN1Q9NPD7 142 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 CELSR3Q9NYQ7 3312 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 PSG1P11464 419 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF25P17030 456 aaPredicted RBP4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 MFAP4P55083 255 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR5R1Q8NH85 324 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 WNT10AQ9GZT5 417 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 SIGLEC8Q9NYZ4 499 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 EPDR1Q9UM22 224 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 DENND4AQ7Z401 1863 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 LOC107984156A0A0G2JMH3 177 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 A0A1B0GV90 55 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 SERTM2A0A1B0GWG4 89 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 CX3CL1P78423 397 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ARL17AQ8IVW1 177 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 NACAE9PAV3 2078 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ORM1P02763 201 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 RIGQ13278 110 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 UNQ5815/PRO19632Q6UWF5 114 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ARL2-SNX15V9GYD0 113 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGKV1OR2-108A0A075B7D4 117 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 E7EQL1 145 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGHV2-70P01814 119 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 SPRNQ5BIV9 151 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 UTF1Q5T230 341 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ATOH7Q8N100 152 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 KIR3DL3Q8N743 410 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 KCNS1Q96KK3 526 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 GNB4Q9HAV0 340 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 SIGLEC9Q9Y336 463 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 NSD1Q96L73 2696 aaPredicted RBP4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGKV3-7A0A075B6H7 116 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 CEACAM4O75871 244 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 YPEL3P61236 119 aaPredicted RBP4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 GNG5P63218 68 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 SSBP4Q9BWG4 385 aaPredicted RBP4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 LOC105371242A0A075B767 164 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 TCF24Q7RTU0 167 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF664Q8N3J9 261 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 NDUFA4L2Q9NRX3 87 aa4.57□□□□□ -1.68
SYNCRIP-204ENST00000616122 DSCAML1Q8TD84 2053 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 FNDC10F2Z333 226 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 UBE2L6O14933 153 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR5AL1P0C617 328 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 DIAPH2-AS1Q14236 149 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM136Q6ZRR5 245 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 DDB2Q92466 427 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGHV2-26A0A0B4J1V2 119 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 BMPR1BO00238 502 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 HBBP68871 147 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 GUSBP1Q15486 140 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 PMCHL1Q16048 86 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 NUDT10Q8NFP7 164 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 NUDT11Q96G61 164 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 ATG101Q9BSB4 218 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 DMXL2Q8TDJ6 3036 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 NBR2O15453 112 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR2J3O76001 311 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 SNCGO76070 127 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 PGLYRP4Q96LB8 373 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 GSX1Q9H4S2 264 aaPredicted RBP4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 EDA2RQ9HAV5 297 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 UQCR10Q9UDW1 63 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 ITPR1Q14643 2758 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 TCRAP04437 139 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 NHLH1Q02575 133 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 KLRB1Q12918 225 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 GBGT1Q8N5D6 347 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGSF10Q6WRI0 2623 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 A0A1B0GWJ7 208 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 KAAG1Q9UBP8 84 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
SYNCRIP-204ENST00000616122 PTPRSQ13332 1948 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGHV3-49A0A0A0MS15 119 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 M0QZK8 103 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 LHBP01229 141 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 GPX1P07203 203 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 ADMP35318 185 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 CDKN1AP38936 164 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 TEX36Q5VZQ5 186 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 TRAV30A0A087WSZ9 112 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 NDUFS6O75380 124 aaKnown RBP4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF324O75467 553 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms