RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TRBV7-1A0A0A6YYK4 115 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 IGHV3-23P01764 117 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 HSPB1P04792 205 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 SCGB2A2Q13296 93 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 OR51G1Q8NGK1 321 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 ITPR2Q14571 2701 aa13.76□□□□□ -0.21
SHKBP1-224ENST00000600718 TRGV3P03979 118 aa13.75□□□□□ -0.21
SHKBP1-224ENST00000600718 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-224ENST00000600718 PQLC2Q6ZP29 291 aa13.75□□□□□ -0.21
SHKBP1-224ENST00000600718 Q8WTZ3 238 aa13.75□□□□□ -0.21
SHKBP1-224ENST00000600718 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 CTSGP08311 255 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 GCHFRP30047 84 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 CFHR3Q02985 330 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 ZANQ9Y493 2812 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 OR2C1O95371 312 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 IGLV1-40P01703 118 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 LYZP61626 148 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 LINC00305Q7Z4B0 112 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 USMG5Q96IX5 58 aa13.74□□□□□ -0.21
SHKBP1-224ENST00000600718 WI2-2373I1.2A0A1W2PRP0 233 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 SRP19P09132 144 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 SSTP61278 116 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 KIAA0141Q14154 515 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 CCDC168Q8NDH2 2452 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
SHKBP1-224ENST00000600718 NDUFS6O75380 124 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 CLEC3BP05452 202 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 TPPP2P59282 170 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 ZNF491Q8N8L2 437 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 FAM167A-AS1Q96KT0 104 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 TMEM167BQ9NRX6 74 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 MRPL27Q9P0M9 148 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 TRAV5A0A0B4J249 113 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 TMEM89A2RUT3 159 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 OR7C2O60412 319 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 PAGE4O60829 102 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 PF4V1P10720 104 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 GPR183P32249 361 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 SOHLH1Q5JUK2 328 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 DNLZQ5SXM8 178 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 MORN5Q5VZ52 161 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 CCDC140Q96MF4 163 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 SLC25A2Q9BXI2 301 aa13.72□□□□□ -0.21
SHKBP1-224ENST00000600718 A0A087WWC5 75 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 LY6G6DO95868 133 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 S100A2P29034 98 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 ADMP35318 185 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 MEF2BQ02080 365 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 TMEM95Q3KNT9 176 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 CLEC19AQ6UXS0 136 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 S100A7AQ86SG5 101 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 Q8N2B8 174 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 STXBP6Q8NFX7 210 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 RNF125Q96EQ8 232 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 ZNF503Q96F45 646 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 DUX5Q96PT3 197 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 CHRDL1Q9BU40 450 aa13.71□□□□□ -0.21
SHKBP1-224ENST00000600718 IGHG4P01861 327 aa13.71□□□□□ -0.22
SHKBP1-224ENST00000600718 IL4P05112 153 aa13.71□□□□□ -0.22
SHKBP1-224ENST00000600718 PYY3Q5JQD4 70 aa13.71□□□□□ -0.22
SHKBP1-224ENST00000600718 SMR3AQ99954 134 aa13.71□□□□□ -0.22
SHKBP1-224ENST00000600718 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.22
SHKBP1-224ENST00000600718 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
SHKBP1-224ENST00000600718 BTF3P20290 206 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-224ENST00000600718 RPS10P46783 165 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-224ENST00000600718 RAB9AP51151 201 aa13.7□□□□□ -0.22
SHKBP1-224ENST00000600718 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
SHKBP1-224ENST00000600718 DNAJC9-AS1A6NH13 148 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 IFITM10A6NMD0 228 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 TGOLN2O43493 480 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 CD81P60033 236 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 DEFA6Q01524 100 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 PAXXQ9BUH6 204 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 ARL2-SNX15V9GYD0 113 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 UBE2G2P60604 165 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 SLC35B1P78383 322 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
SHKBP1-224ENST00000600718 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 CLDN34H7C241 214 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 SRD5A1P18405 259 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 PSMB8P28062 276 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 CST9LP1Q5W188 147 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 CYB561D1Q8N8Q1 229 aa13.68□□□□□ -0.22
SHKBP1-224ENST00000600718 NDUFA6P56556 154 aa13.67□□□□□ -0.22
SHKBP1-224ENST00000600718 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-224ENST00000600718 OR4F5Q8NH21 305 aa13.67□□□□□ -0.22
SHKBP1-224ENST00000600718 OR4F4Q96R69 305 aa13.67□□□□□ -0.22
SHKBP1-224ENST00000600718 SHANK2-AS3Q9BTD1 123 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms