RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NUP37Q8NFH4 326 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 Q6ZVH6 145 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 OR1B1Q8NGR6 318 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 CEACAM4O75871 244 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 P01737 135 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 ZNF137PP52743 207 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 RUSC1-AS1Q66K80 236 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 SH2D7A6NKC9 451 aaPredicted RBP11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 GP9P14770 177 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 PLP1P60201 277 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 CCL8P80075 99 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 NDFIP1Q9BT67 221 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
SMARCA4-219ENST00000592604 TCRAP04437 139 aa11.9□□□□□ -0.51
SMARCA4-219ENST00000592604 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.51
SMARCA4-219ENST00000592604 TMEM116Q8NCL8 245 aa11.9□□□□□ -0.51
SMARCA4-219ENST00000592604 ZNF479Q96JC4 524 aa11.9□□□□□ -0.51
SMARCA4-219ENST00000592604 CST9LQ9H4G1 147 aa11.9□□□□□ -0.51
SMARCA4-219ENST00000592604 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 LGALS7P47929 136 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 DEFB109BQ30KR1 87 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 PGLYRP4Q96LB8 373 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
SMARCA4-219ENST00000592604 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 PAX2Q02962 417 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 ZADH2Q8N4Q0 377 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 RITA1Q96K30 269 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 Q9H3A6 140 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 IGHV2-70DA0A0C4DH43 119 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 C17orf100A8MU93 164 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 C8orf46Q8TAG6 207 aa11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-219ENST00000592604 LINC00173Q6ZV60 143 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 CD24P25063 80 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 PRR31Q5SQ13 230 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 HCP5Q6MZN7 132 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 PF4V1P10720 104 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 FBLN7Q53RD9 439 aa11.87□□□□□ -0.51
SMARCA4-219ENST00000592604 HAX1O00165 279 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 LIPFP07098 398 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 DLX6P56179 175 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 TMEM191AQ9H0A3 160 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
SMARCA4-219ENST00000592604 OVOL3O00110 214 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 NDUFB3O43676 98 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 IGFL3Q6UXB1 125 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 PIP4P1Q86T03 277 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 Q86TA4 180 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 ZNF835Q9Y2P0 537 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 CHEK1O14757 476 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 ADIPOQQ15848 244 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 MEGF9Q9H1U4 602 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 TMEM14CQ9P0S9 112 aa11.85□□□□□ -0.51
SMARCA4-219ENST00000592604 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 CRYGBP07316 175 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 CRYBA4P53673 196 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 SLC25A34Q6PIV7 304 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 IGLV2-11P01706 119 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 COL8A1P27658 744 aa11.84□□□□□ -0.51
SMARCA4-219ENST00000592604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 A0A1B0GV72 72 aa11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 H3BTX0 84 aa11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 LOXP28300 417 aaPredicted RBP11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 HIGD1AQ9Y241 93 aa11.83□□□□□ -0.51
SMARCA4-219ENST00000592604 GNG7O60262 68 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 HLA-DRB1P01911 266 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 RHOGP84095 191 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 TMEM155Q4W5P6 130 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 ASCL5Q7RTU5 278 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms