RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 LINC00299Q6ZSB3 139 aa11.9□□□□□ -0.5
SEC11C-205ENST00000588875 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
SEC11C-205ENST00000588875 Q8WTZ3 238 aa11.9□□□□□ -0.5
SEC11C-205ENST00000588875 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
SEC11C-205ENST00000588875 PLA2G10O15496 165 aa11.89□□□□□ -0.51
SEC11C-205ENST00000588875 IAPPP10997 89 aa11.89□□□□□ -0.51
SEC11C-205ENST00000588875 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
SEC11C-205ENST00000588875 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
SEC11C-205ENST00000588875 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
SEC11C-205ENST00000588875 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
SEC11C-205ENST00000588875 HERC1Q15751 4861 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 LYRM1O43325 122 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 SYNGR2O43760 224 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 ADAP1O75689 374 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 TOMM40O96008 361 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
SEC11C-205ENST00000588875 RAB11AP62491 216 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 C4orf46Q504U0 113 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 U3KQE9 123 aa11.88□□□□□ -0.51
SEC11C-205ENST00000588875 IFNA21P01568 189 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 P2RY1P47900 373 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
SEC11C-205ENST00000588875 GAMTQ14353 236 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 MAGT1Q9H0U3 335 aa11.87□□□□□ -0.51
SEC11C-205ENST00000588875 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
SEC11C-205ENST00000588875 A6NHS1 94 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 WRBO00258 174 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 IL4P05112 153 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 HNRNPCP07910 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
SEC11C-205ENST00000588875 ID3Q02535 119 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 UBE2DNLQ8IWF7 75 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 C20orf85Q9H1P6 137 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
SEC11C-205ENST00000588875 PSG1P11464 419 aa11.85□□□□□ -0.51
SEC11C-205ENST00000588875 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
SEC11C-205ENST00000588875 OR4D5Q8NGN0 318 aa11.85□□□□□ -0.51
SEC11C-205ENST00000588875 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
SEC11C-205ENST00000588875 S100ZQ8WXG8 99 aa11.85□□□□□ -0.51
SEC11C-205ENST00000588875 PAIP2BQ9ULR5 123 aaKnown RBP11.85□□□□□ -0.51
SEC11C-205ENST00000588875 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 ZFP92A6NM28 416 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 TCRBP04435 133 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 EIF2B2P49770 351 aaKnown RBP11.84□□□□□ -0.51
SEC11C-205ENST00000588875 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 SOHLH1Q5JUK2 328 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 C16orf54Q6UWD8 224 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 GLMPQ8WWB7 406 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 DNAH5Q8TE73 4624 aa11.84□□□□□ -0.51
SEC11C-205ENST00000588875 HELTA6NFD8 242 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 FABP1P07148 127 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 NKX2-1P43699 371 aaPredicted RBP11.83□□□□□ -0.52
SEC11C-205ENST00000588875 POLR2GP62487 172 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEC11C-205ENST00000588875 SPANXN5Q5MJ07 72 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 RNF125Q96EQ8 232 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 FAM210BQ96KR6 192 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 TRGV9Q99603 122 aa11.83□□□□□ -0.52
SEC11C-205ENST00000588875 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
SEC11C-205ENST00000588875 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 AP2S1P53680 142 aaPredicted RBP11.82□□□□□ -0.52
SEC11C-205ENST00000588875 EMP1P54849 157 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 ZNF90Q03938 601 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 TNP2Q05952 138 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 IAH1Q2TAA2 248 aaPredicted RBP11.82□□□□□ -0.52
SEC11C-205ENST00000588875 RNF212Q495C1 297 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 ZNF705AQ6ZN79 300 aaPredicted RBP11.82□□□□□ -0.52
SEC11C-205ENST00000588875 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
SEC11C-205ENST00000588875 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 H3BMM0 161 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 H3BP45 60 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 BUB3O43684 328 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 NUP62P37198 522 aaPredicted RBP11.81□□□□□ -0.52
SEC11C-205ENST00000588875 ZBTB8BQ8NAP8 495 aaPredicted RBP11.81□□□□□ -0.52
SEC11C-205ENST00000588875 NEU1Q99519 415 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 PTTG2Q9NZH5 202 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 PFDN2Q9UHV9 154 aa11.81□□□□□ -0.52
SEC11C-205ENST00000588875 ZNF705FA8MVS1 300 aaPredicted RBP11.8□□□□□ -0.52
SEC11C-205ENST00000588875 SNRPGP15A8MWD9 76 aa11.8□□□□□ -0.52
SEC11C-205ENST00000588875 SSSCA1O60232 199 aa11.8□□□□□ -0.52
SEC11C-205ENST00000588875 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
SEC11C-205ENST00000588875 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
SEC11C-205ENST00000588875 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
SEC11C-205ENST00000588875 SMIM8Q96KF7 97 aa11.8□□□□□ -0.52
SEC11C-205ENST00000588875 PBDC1Q9BVG4 233 aa11.8□□□□□ -0.52
SEC11C-205ENST00000588875 FAM240BA0A1B0GVZ2 78 aa11.79□□□□□ -0.52
SEC11C-205ENST00000588875 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
SEC11C-205ENST00000588875 PAX9P55771 341 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms