RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF414Q96IQ9 312 aa8.85□□□□□ -0.99
SMAD4-205ENST00000588745 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-205ENST00000588745 KLK15Q9H2R5 256 aa8.85□□□□□ -0.99
SMAD4-205ENST00000588745 GNB4Q9HAV0 340 aa8.85□□□□□ -0.99
SMAD4-205ENST00000588745 CDC42EP3Q9UKI2 254 aa8.85□□□□□ -0.99
SMAD4-205ENST00000588745 PUS1Q9Y606 427 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMAD4-205ENST00000588745 A0A0G2JLM5 398 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 C11orf94C9JXX5 98 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 H3BRN7 92 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 CLDN34H7C241 214 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 PSMB8P28062 276 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 ATP5G3P48201 142 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 RAB9AP51151 201 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 SLC35B1P78383 322 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 S100A7AQ86SG5 101 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 CYB561D1Q8N8Q1 229 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 PAXXQ9BUH6 204 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 OR51M1Q9H341 326 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 ESM1Q9NQ30 184 aa8.84□□□□□ -0.99
SMAD4-205ENST00000588745 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.83□□□□□ -1
SMAD4-205ENST00000588745 FAM74A7A6NL05 159 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 TMEM250H0YL14 139 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 OR10J4P0C629 311 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 PYYP10082 97 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 CD99P14209 185 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 GP9P14770 177 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 FOSL1P15407 271 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 ARL3P36405 182 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 RELQ04864 619 aaPredicted RBP8.83□□□□□ -1
SMAD4-205ENST00000588745 SOHLH1Q5JUK2 328 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 CST9LP1Q5W188 147 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 LCNL1Q6ZST4 164 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 CCDC28AQ8IWP9 274 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 SVBPQ8N300 66 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 OR4F5Q8NH21 305 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
SMAD4-205ENST00000588745 OR4F4Q96R69 305 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
SMAD4-205ENST00000588745 YTHDF2Q9Y5A9 579 aaKnown RBP8.83□□□□□ -1
SMAD4-205ENST00000588745 FAM181BA6NEQ2 426 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 PPP5D1E7EU14 171 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 BMPR1BO00238 502 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 PDE6DO43924 150 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 IGHV3-11P01762 117 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
SMAD4-205ENST00000588745 ELANEP08246 267 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 CEBPGP53567 150 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 FOXE3Q13461 319 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 KIAA0141Q14154 515 aaPredicted RBP8.82□□□□□ -1
SMAD4-205ENST00000588745 GUCA2BQ16661 112 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 FAM90A2PQ658T7 463 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 LEMD1Q68G75 181 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 ZNF343Q6P1L6 599 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 TEX38Q6PEX7 206 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 C10orf99Q6UWK7 81 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 TOMM20LQ6UXN7 152 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 Q6ZSV7 163 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 FXYD5Q96DB9 178 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 SERTAD4Q9NUC0 356 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 TMEM14CQ9P0S9 112 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 RABAC1Q9UI14 185 aa8.82□□□□□ -1
SMAD4-205ENST00000588745 IGHV3-35A0A0C4DH35 117 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 A0A1W2PRE2 83 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 F6UZH7 168 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 TRBV12-3P01733 135 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 S100A7P31151 101 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 HILS1P60008 231 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 RPL15P61313 204 aaKnown RBP8.81□□□□□ -1
SMAD4-205ENST00000588745 FAM209BQ5JX69 171 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 OR4X2Q8NGF9 303 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
SMAD4-205ENST00000588745 HIVEP2P31629 2446 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 ZNF98A6NK75 572 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 GGTLC3B5MD39 225 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 SNAPINO95295 136 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 RNF152Q8N8N0 203 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 RNF24Q9Y225 148 aa8.8□□□□□ -1
SMAD4-205ENST00000588745 NDUFA4O00483 81 aa8.79□□□□□ -1
SMAD4-205ENST00000588745 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
SMAD4-205ENST00000588745 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
SMAD4-205ENST00000588745 BPIFA4PQ86YQ2 179 aa8.79□□□□□ -1
SMAD4-205ENST00000588745 C11orf52Q96A22 123 aa8.79□□□□□ -1
SMAD4-205ENST00000588745 PARLQ9H300 379 aa8.79□□□□□ -1
SMAD4-205ENST00000588745 MTORP42345 2549 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 IGHV3OR16-8A0A075B7F1 116 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 SCO2A0A1W2PP80 73 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 CLPSL1A2RUU4 121 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 INAFM1C9JVW0 142 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 SCO1O75880 301 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 CRYBA1P05813 215 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 NBEAP1P0C6P0 100 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 HIST1H1EP10412 219 aaKnown RBP8.78□□□□□ -1
SMAD4-205ENST00000588745 NPPCP23582 126 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 ATRAIDQ6UW56 229 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 Q71RC1 249 aaPredicted RBP8.78□□□□□ -1
SMAD4-205ENST00000588745 KLHDC1Q8N7A1 406 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 CLRN3Q8NCR9 226 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 OR4F17Q8NGA8 305 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms