RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 VSIRQ9H7M9 311 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 PXMP4Q9Y6I8 212 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 BMPR1BO00238 502 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 CLN5O75503 358 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 IGLC1P0CG04 106 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 FCGR2BP31994 310 aaPredicted RBP8.42□□□□□ -1.06
TOP3A-216ENST00000583804 MYCNOSP40205 109 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 RAB2AP61019 212 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 RPEL1Q2QD12 228 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 STPG3Q8N7X2 389 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 TMEM116Q8NCL8 245 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 CHRDL1Q9BU40 450 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 TUBA4BQ9H853 241 aa8.42□□□□□ -1.06
TOP3A-216ENST00000583804 LSM4Q9Y4Z0 139 aaKnown RBP8.42□□□□□ -1.06
TOP3A-216ENST00000583804 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 C17orf112F2Z3M2 114 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
TOP3A-216ENST00000583804 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 CTSGP08311 255 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 FOLR2P14207 255 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 HOXD3P31249 432 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-216ENST00000583804 FHITP49789 147 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 SLURP1P55000 103 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 LYZP61626 148 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 B2MP61769 119 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 TMEM88Q6PEY1 159 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 SPSB3Q6PJ21 355 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 THAP8Q8NA92 274 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 FAM213BQ8TBF2 198 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 PSMG3Q9BT73 122 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-216ENST00000583804 SMCO4Q9NRQ5 59 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 SLC45A2Q9UMX9 530 aa8.41□□□□□ -1.06
TOP3A-216ENST00000583804 FNDC10F2Z333 226 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
TOP3A-216ENST00000583804 YIF1AO95070 293 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 IGKV1-17P01599 117 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 HBE1P02100 147 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 LINC00869P0C866 280 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 ADMP35318 185 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 PPT1P50897 306 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 RAB31Q13636 194 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF320A2RRD8 509 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 PSG1P11464 419 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 ORM2P19652 201 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
TOP3A-216ENST00000583804 FHL3Q13643 280 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 RHEBQ15382 184 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 SPATA31B1PQ5VZV4 182 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 TRGV9Q99603 122 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
TOP3A-216ENST00000583804 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
TOP3A-216ENST00000583804 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 COLCA2A8K830 154 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 MPDU1O75352 247 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 OR5G3P0C626 314 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 RD3LP0DJH9 198 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 RNF212Q495C1 297 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 SSX7Q7RTT5 188 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 GPHB5Q86YW7 130 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 Q8WTZ3 238 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 DLX4Q92988 240 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-216ENST00000583804 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 MLXQ9UH92 298 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 TIMM9Q9Y5J7 89 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
TOP3A-216ENST00000583804 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 IL4P05112 153 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 FABP1P07148 127 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 SERF2P84101 59 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PRR20EP86478 221 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PRR20CP86479 221 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PRR20DP86480 221 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PRR20BP86481 221 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 PRR20AP86496 221 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 KLF5Q13887 457 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-216ENST00000583804 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 OR10G4Q8NGN3 311 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 OR10G9Q8NGN4 311 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 OR10G7Q8NGN6 311 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 RCC1LQ96I51 464 aaKnown RBP8.38□□□□□ -1.07
TOP3A-216ENST00000583804 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
TOP3A-216ENST00000583804 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms