RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TRPT1Q86TN4 253 aaKnown RBP7.3□□□□□ -1.24
RPA1-206ENST00000573994 OR11H2Q8NH07 326 aa7.3□□□□□ -1.24
RPA1-206ENST00000573994 RARRES2Q99969 163 aa7.3□□□□□ -1.24
RPA1-206ENST00000573994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
RPA1-206ENST00000573994 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
RPA1-206ENST00000573994 BUB3O43684 328 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 SYNGR2O43760 224 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 IFNA21P01568 189 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
RPA1-206ENST00000573994 IL7P13232 177 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 S100A7P31151 101 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
RPA1-206ENST00000573994 C4orf46Q504U0 113 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
RPA1-206ENST00000573994 COQ8AQ8NI60 647 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 NRN1Q9NPD7 142 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 CLEC5AQ9NY25 188 aa7.29□□□□□ -1.24
RPA1-206ENST00000573994 IGKV1OR2-108A0A075B7D4 117 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 NUPR2A6NF83 97 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 SNRPGP15A8MWD9 76 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 SSSCA1O60232 199 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 OR4E1P0C645 316 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 SPP1P10451 314 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 DEFB1P60022 68 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 NANOS2P60321 138 aaKnown RBP7.28□□□□□ -1.24
RPA1-206ENST00000573994 POLR2GP62487 172 aaKnown RBP eCLIP7.28□□□□□ -1.24
RPA1-206ENST00000573994 AKR1C1Q04828 323 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 C1orf194Q5T5A4 169 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 SAMD13Q5VXD3 122 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 LINC00299Q6ZSB3 139 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 ACOT7LQ6ZUV0 252 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 PPP1R14BQ96C90 147 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 FBXL17Q9UF56 701 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
RPA1-206ENST00000573994 SMCO3A2RU48 225 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 SCGB1D2O95969 90 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 NUTF2P61970 127 aaKnown RBP7.27□□□□□ -1.25
RPA1-206ENST00000573994 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
RPA1-206ENST00000573994 THAP8Q8NA92 274 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 OR4D5Q8NGN0 318 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 RAB40CQ96S21 281 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 TRGV9Q99603 122 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 WDR12Q9GZL7 423 aaKnown RBP7.27□□□□□ -1.25
RPA1-206ENST00000573994 C20orf85Q9H1P6 137 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 C11orf68Q9H3H3 251 aaKnown RBP7.27□□□□□ -1.25
RPA1-206ENST00000573994 SLC45A2Q9UMX9 530 aa7.27□□□□□ -1.25
RPA1-206ENST00000573994 STRAPQ9Y3F4 350 aaKnown RBP7.27□□□□□ -1.25
RPA1-206ENST00000573994 DNAH10Q8IVF4 4471 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 IGHV4-28A0A0C4DH34 117 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 CCNKO75909 580 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 LY6G6CO95867 125 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
RPA1-206ENST00000573994 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
RPA1-206ENST00000573994 IAH1Q2TAA2 248 aaPredicted RBP7.26□□□□□ -1.25
RPA1-206ENST00000573994 Q8NAQ8 132 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
RPA1-206ENST00000573994 LINC00052Q96N35 136 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 MFFQ9GZY8 342 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 SLC25A22Q9H936 323 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 PSENENQ9NZ42 101 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 KLK5Q9Y337 293 aaPredicted RBP7.26□□□□□ -1.25
RPA1-206ENST00000573994 KMT2AQ03164 3969 aa7.26□□□□□ -1.25
RPA1-206ENST00000573994 CCSO14618 274 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 PLA2G10O15496 165 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 LYRM1O43325 122 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 IGKV3-20P01619 116 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 ORM2P19652 201 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 ID1P41134 155 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 RRAS2P62070 204 aaPredicted RBP7.25□□□□□ -1.25
RPA1-206ENST00000573994 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 GDF5OSQ5U4N7 250 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 TMEM182Q6ZP80 229 aaPredicted RBP7.25□□□□□ -1.25
RPA1-206ENST00000573994 S100A7AQ86SG5 101 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 OR8I2Q8N0Y5 310 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 ZBTB8BQ8NAP8 495 aaPredicted RBP7.25□□□□□ -1.25
RPA1-206ENST00000573994 OR1B1Q8NGR6 318 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 CCDC32Q9BV29 185 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 SLC25A32Q9H2D1 315 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 DOK5Q9P104 306 aa7.25□□□□□ -1.25
RPA1-206ENST00000573994 TRAV6A0A075B6T7 132 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 FNDC10F2Z333 226 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 H3BMM0 161 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 SOCS3O14543 225 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 METTL15P1P0C7V9 234 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
RPA1-206ENST00000573994 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 HLA-DRB4P13762 266 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 MEOX2P50222 304 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 FXYD7P58549 80 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 TAS2R30P59541 319 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 RBMY1FQ15415 496 aaKnown RBP7.24□□□□□ -1.25
RPA1-206ENST00000573994 SPATA31B1PQ5VZV4 182 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 BPIFCQ8NFQ6 507 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 MITD1Q8WV92 249 aa7.24□□□□□ -1.25
RPA1-206ENST00000573994 SMIM8Q96KF7 97 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms