RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TCRAP04437 139 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 ADIPOQQ15848 244 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 C5orf17Q8NAS9 161 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 TOMM40O96008 361 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 CIARTQ8N365 385 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-205ENST00000571272 MUC15Q8N387 334 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 NDUFB3O43676 98 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 LEPROTL1O95214 131 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 PCP4P48539 62 aa13.97□□□□□ -0.17
SCARF1-205ENST00000571272 RNASE8Q8TDE3 154 aaKnown RBP13.97□□□□□ -0.17
SCARF1-205ENST00000571272 C19orf71A6NCJ1 209 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 SYS1-DBNDD2H3BUS1 97 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 LTAP01374 205 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 GP9P14770 177 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 TMEM108Q6UXF1 575 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 ASCL2Q99929 193 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 CTSZQ9UBR2 303 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 MALRD1Q5VYJ5 2156 aa13.96□□□□□ -0.17
SCARF1-205ENST00000571272 UBE2V1Q13404 147 aa13.96□□□□□ -0.18
SCARF1-205ENST00000571272 ETFRF1Q6IPR1 90 aa13.96□□□□□ -0.18
SCARF1-205ENST00000571272 C22orf15Q8WYQ4 148 aa13.96□□□□□ -0.18
SCARF1-205ENST00000571272 FMC1Q96HJ9 113 aa13.96□□□□□ -0.18
SCARF1-205ENST00000571272 IGHV1-69-2A0A0G2JMI3 117 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 TMEM178BH3BS89 294 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 CHEK1O14757 476 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 CRYGCP07315 174 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 COL8A1P27658 744 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 MPV17L2Q567V2 206 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 LRRC10Q5BKY1 277 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 RBPMS2Q6ZRY4 209 aaKnown RBP13.95□□□□□ -0.18
SCARF1-205ENST00000571272 TRGV9Q99603 122 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 K7EM74 188 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 CSN3P07498 182 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 LYZP61626 148 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
SCARF1-205ENST00000571272 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
SCARF1-205ENST00000571272 NUP37Q8NFH4 326 aa13.94□□□□□ -0.18
SCARF1-205ENST00000571272 CUL9Q8IWT3 2517 aa13.94□□□□□ -0.18
SCARF1-205ENST00000571272 PRNTQ86SH4 94 aa13.94□□□□□ -0.18
SCARF1-205ENST00000571272 SMIM12Q96EX1 92 aa13.94□□□□□ -0.18
SCARF1-205ENST00000571272 TACC2O95359 2948 aa13.94□□□□□ -0.18
SCARF1-205ENST00000571272 CEACAM4O75871 244 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 BSPH1Q075Z2 132 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 GOLT1AQ6ZVE7 132 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 PMCHL2Q9BQD1 86 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 PIEZO2Q9H5I5 2752 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 ACACAQ13085 2346 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 LOXP28300 417 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-205ENST00000571272 MC5RP33032 325 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 TMEM116Q8NCL8 245 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 C8orf46Q8TAG6 207 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-205ENST00000571272 CRXO43186 299 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-205ENST00000571272 CEACAM8P31997 349 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-205ENST00000571272 CT83Q5H943 113 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 FAM162BQ5T6X4 162 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 CHCHD1Q96BP2 118 aaKnown RBP13.93□□□□□ -0.18
SCARF1-205ENST00000571272 ZNF492Q9P255 531 aa13.93□□□□□ -0.18
SCARF1-205ENST00000571272 PSG1P11464 419 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 LGALS7P47929 136 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 SH3BGRL2Q9UJC5 107 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 ZZEF1O43149 2961 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 NUDT3O95989 172 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 FAM71F2Q6NXP2 309 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 HIGD1AQ9Y241 93 aa13.92□□□□□ -0.18
SCARF1-205ENST00000571272 ATMQ13315 3056 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 IGHV1-8P0DP01 117 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 FBLN7Q53RD9 439 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 Q86TA4 180 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
SCARF1-205ENST00000571272 LOC105371242A0A075B767 164 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 VAMP3Q15836 100 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 ST20Q9HBF5 79 aa13.91□□□□□ -0.18
SCARF1-205ENST00000571272 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 DLX6P56179 175 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 TMUB1Q9BVT8 246 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 APC2O95996 2303 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 C16orf97H3BN30 126 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 Q6ZS92 163 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 PRSS33Q8NF86 280 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 GFRA4Q9GZZ7 299 aa13.9□□□□□ -0.18
SCARF1-205ENST00000571272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.89□□□□□ -0.19
SCARF1-205ENST00000571272 RBP4P02753 201 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 HTR1DP28221 377 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TMEM155Q4W5P6 130 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 OR4C5Q8NGB2 326 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 SLC25A39Q9BZJ4 359 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TMEM191AQ9H0A3 160 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 SLC25A34Q6PIV7 304 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TEX45Q8NA69 505 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 C17orf77Q96MU5 243 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 MAP1LC3CQ9BXW4 147 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 SPTBN2O15020 2390 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
SCARF1-205ENST00000571272 HSBP1L1C9JCN9 74 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms