RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 LINC00471Q8N535 108 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ANKRD29Q8N6D5 301 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00301Q8NCQ3 95 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 PLPP5Q8NEB5 264 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OR10AC1Q8NH08 325 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SLC25A40Q8TBP6 338 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 PTH2Q96A98 100 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TOMM6Q96B49 74 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OPTNQ96CV9 577 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SLAMF6Q96DU3 332 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 KIFC1Q9BW19 673 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM126AQ9H061 195 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 WFDC10AQ9H1F0 79 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OSTCQ9NRP0 149 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SLC39A9Q9NUM3 307 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 UQCC1Q9NVA1 299 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 C14orf105Q9NVL8 296 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 FKBP14Q9NWM8 211 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 RASL12Q9NYN1 266 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 IDI2-AS1Q9NZ38 188 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CHMP5Q9NZZ3 219 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM14CQ9P0S9 112 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 PCTPQ9UKL6 214 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ASB4Q9Y574 426 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 NUP155O75694 1391 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 MYH1P12882 1939 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PIK3R4Q99570 1358 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SPTBN2O15020 2390 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 C2CD3Q4AC94 2353 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 MAP2P11137 1827 aaKnown RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TRAV23DV6A0A075B6W5 121 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TRAV10A0A0B4J240 114 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TRBV30A0A0K0K1B3 111 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 ERICH2A1L162 156 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 ZNF727A8MUV8 499 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 M0QX08 132 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SSNA1O43805 119 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TIMM17BO60830 172 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 OR2B3O76000 313 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 LYPLA2O95372 231 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 DEXIO95424 95 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PPYP01298 95 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 OCMP0CE72 109 aaPredicted RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SMIM17P0DL12 118 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 HIST1H1EP10412 219 aaKnown RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 KDELR1P24390 212 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SERPINB9P50453 376 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 RANP62826 216 aaKnown RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TSNQ15631 228 aaKnown RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 FAM74A1Q5RGS3 127 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 HIST2H3PS2Q5TEC6 136 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 HAGHLQ6PII5 290 aaPredicted RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 FAM151BQ6UXP7 276 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PATE2Q6UY27 113 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 LYG2Q86SG7 212 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 Q86TA4 180 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PRR15Q8IV56 129 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PDZD9Q8IXQ8 264 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 ST6GALNAC3Q8NDV1 305 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SLC30A7Q8NEW0 376 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 OR2T35Q8NGX2 323 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 OR10K1Q8NGX5 313 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 MCFD2Q8NI22 146 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PIGXQ8TBF5 258 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PSMF1Q92530 271 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 C8orf76Q96K31 380 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 ATP6V1G3Q96LB4 118 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 CCL19Q99731 98 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 HIST1H2BLQ99880 126 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 PRADC1Q9BSG0 188 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 CCDC94Q9BW85 323 aaPredicted RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 C20orf27Q9GZN8 174 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 C6orf62Q9GZU0 229 aaPredicted RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 ORMDL1Q9P0S3 153 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SLC35A3Q9Y2D2 325 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM56-RWDD3S4R434 201 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SNAPC4Q5SXM2 1469 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 APC2O95996 2303 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 MYO3BQ8WXR4 1341 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 FRMPD1Q5SYB0 1578 aa-0.19□□□□□ -2.44
FOXN3-216ENST00000557496 KDM6BO15054 1643 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 CCDC144AA2RUR9 1427 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 NCOA1Q15788 1441 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PLXNA1Q9UIW2 1896 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 A0A087WSZ3 146 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 A0A087X0T9 212 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 A0A1W2PRS3 328 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 hADV38S2A0JD32 116 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 C9orf170A2RU37 121 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 CLDN24A6NM45 220 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 FAM25EA8MYX2 175 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 E7EUB6 86 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 LRRN3E7EW58 273 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 F8W1H4 67 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 JMJD7-PLA2G4BH0Y9G9 81 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 K7ERJ3 54 aa-0.2□□□□□ -2.44
FOXN3-216ENST00000557496 PROSCO94903 275 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms