RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RNASE7Q9H1E1 156 aaKnown RBP7.4□□□□□ -1.22
SYNE3-205ENST00000557275 KNCNA6PVL3 124 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 C8orf82Q6P1X6 216 aaPredicted RBP7.4□□□□□ -1.22
SYNE3-205ENST00000557275 TRBV7-1A0A0A6YYK4 115 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 PSG3Q16557 428 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 PRSS22Q9GZN4 317 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 hADV29S1A0JD25 119 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 EFEMP2O95967 443 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 TCRAP04437 139 aa7.4□□□□□ -1.22
SYNE3-205ENST00000557275 FAM231BA6NCW3 169 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 AMBPP02760 352 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 DRD3P35462 400 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 A0A1W2PPV9 198 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 KLRD1Q13241 179 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 IGHV3-72A0A0B4J1Y9 119 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 PYY3Q5JQD4 70 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 FAM168AQ92567 244 aa7.4□□□□□ -1.23
SYNE3-205ENST00000557275 ADAMTSL3P82987 1691 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 LY75O60449 1722 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 C2CD4DB7Z1M9 353 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 IGKV1D-33P01593 117 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 IGKV1-33P01594 117 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 TAL2Q16559 108 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 ZNF71Q9NQZ8 489 aaPredicted RBP7.39□□□□□ -1.23
SYNE3-205ENST00000557275 IGHV5-10-1A0A0J9YXX1 117 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 USP9XQ93008 2570 aaPredicted RBP7.39□□□□□ -1.23
SYNE3-205ENST00000557275 FNDC10F2Z333 226 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 NRXN3Q9Y4C0 1643 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 A0A1B0GTL3 188 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 SMAD7O15105 426 aaKnown RBP7.39□□□□□ -1.23
SYNE3-205ENST00000557275 CT62P0C5K7 136 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 STPG4Q8N801 248 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 TGIF1Q15583 401 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 TPRX1Q8N7U7 411 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 RAMP1O60894 148 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 SPXQ9BT56 116 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 NCOR2Q9Y618 2525 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 A0A1W2PPI3 338 aa7.39□□□□□ -1.23
SYNE3-205ENST00000557275 F6UB75 175 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 D6R8Y8 96 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 MTORP42345 2549 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 DEFB124Q8NES8 71 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 SRSF8Q9BRL6 282 aaKnown RBP7.38□□□□□ -1.23
SYNE3-205ENST00000557275 OOSP1A8MZH6 123 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 NHSL1Q5SYE7 1610 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 F8VVB4 439 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 F8VWA3 439 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 LINC01465Q8N7H1 131 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 ZNF114Q8NC26 417 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 SVIPQ8NHG7 77 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 KIAA1549Q9HCM3 1950 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 USMG5Q96IX5 58 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 C9orf118A6NHY6 69 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
SYNE3-205ENST00000557275 KLHDC3Q9BQ90 382 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 SLC25A28Q96A46 364 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 NABP1Q96AH0 204 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 RNF5Q99942 180 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 LINC00271P0C7V0 271 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 PAX8Q06710 450 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 PRSS41Q7RTY9 318 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 UPK3AO75631 287 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
SYNE3-205ENST00000557275 PSG8Q9UQ74 426 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 RFNGQ9Y644 331 aa7.38□□□□□ -1.23
SYNE3-205ENST00000557275 AMN1Q8IY45 258 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 TRGV9Q99603 122 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 ZNF138P52744 262 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 NBL1P41271 181 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 EFNB3Q15768 340 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 PCDH15Q96QU1 1955 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 GAGE12HA6NDE8 117 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 PRCDQ00LT1 54 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 A0A1B0GTI1 187 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 ZNF525Q8N782 197 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 RCHY1Q96PM5 261 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 PSG1P11464 419 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 DSCR9P59020 149 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
SYNE3-205ENST00000557275 HAMPP81172 84 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 DENND4CQ5VZ89 1909 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 THAP8Q8NA92 274 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 LCTP09848 1927 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 NDUFB1O75438 58 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 IGHV1OR15-9A0A0B4J2B8 117 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 TFF3Q07654 80 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
SYNE3-205ENST00000557275 IGHV1-45A0A0A0MS14 117 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 MSGN1A6NI15 193 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 SIVA1O15304 175 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 IGLV1-36A0A0B4J1U3 117 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 CRLF1O75462 422 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 MRPL14Q6P1L8 145 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms