RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 NAA60Q9H7X0 242 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 TMEM56-RWDD3S4R434 201 aa3.52□□□□□ -1.85
SCAF11-214ENST00000550893 RYR1P21817 5038 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 IGHV3-49A0A0A0MS15 119 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 TRBV7-1A0A0A6YYK4 115 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 C3orf85A0A1B0GTC6 90 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 MPTX1A8MV57 137 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 CHEK1O14757 476 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 CREBL2O60519 120 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 RAB3DO95716 219 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 TMEM50AO95807 157 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 HIST1H1BP16401 226 aaKnown RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 ETV6P41212 452 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 RPL5P46777 297 aaKnown RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 DHODHQ02127 395 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 SSBP1Q04837 148 aaKnown RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 CBX3Q13185 183 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 RNASE10Q5GAN6 216 aaKnown RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 THOC7Q6I9Y2 204 aaKnown RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 TOMM20LQ6UXN7 152 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 SLC25A42Q86VD7 318 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 SLC35G3Q8N808 338 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 CD300LFQ8TDQ1 290 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 EEF1AKMT3Q96AZ1 226 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 GALNT14Q96FL9 552 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 BSCL2Q96G97 398 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-214ENST00000550893 RNF2Q99496 336 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 COMMD5Q9GZQ3 224 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 SRD5A3Q9H8P0 318 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 VCX3AQ9NNX9 186 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 PRNDQ9UKY0 176 aa3.51□□□□□ -1.85
SCAF11-214ENST00000550893 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 IGHV3-74A0A0B4J1X5 117 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 IGHV7-4-1A0A0J9YVY3 117 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 LCE6AA0A183 80 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 FAM25AB3EWG3 89 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 FAM25CB3EWG5 89 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 FAM25GB3EWG6 89 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 NDUFA4O00483 81 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 IGLC1P0CG04 106 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 C4BPBP20851 252 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 DSCR10P59022 87 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 TAS2R19P59542 299 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 DEFB1P60022 68 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 SURF2Q15527 256 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-214ENST00000550893 USF2Q15853 346 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-214ENST00000550893 PRSS54Q6PEW0 395 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 LYZL2Q7Z4W2 148 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 DCANP1Q8TF63 244 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 CXorf58Q96LI9 332 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 C11orf1Q9H5F2 150 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 DAZ1Q9NQZ3 744 aaKnown RBP3.5□□□□□ -1.85
SCAF11-214ENST00000550893 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
SCAF11-214ENST00000550893 UBQLN2Q9UHD9 624 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 SMPXQ9UHP9 88 aa3.5□□□□□ -1.85
SCAF11-214ENST00000550893 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 OR11H12B2RN74 326 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 C3orf84H3BNL1 204 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 K7EMT4 169 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 SOCS3O14543 225 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 PLA2G10O15496 165 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 NUPL2O15504 423 aaKnown RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 CCNKO75909 580 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 AKAIN1P0CW23 69 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 MFAP4P55083 255 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 TSPAN5P62079 268 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 MRPS10P82664 201 aaKnown RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 TNFRSF9Q07011 255 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 PPP1R1AQ13522 171 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 IL18Q14116 193 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 TIGITQ495A1 244 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 SCGB2B2Q4G0G5 96 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 C2orf83Q53S99 150 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 ZNF57Q68EA5 555 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 ZFAND6Q6FIF0 208 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 SLC25A24Q6NUK1 477 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 HSD17B13Q7Z5P4 300 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 APRG1Q8IVJ8 170 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 CMTM1Q8IZ96 169 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 LRTM2Q8N967 370 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 OR4X1Q8NH49 305 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 OR52E5Q8NH55 327 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 MCFD2Q8NI22 146 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 AP3S1Q92572 193 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 RBPMSQ93062 196 aaKnown RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 DIRAS2Q96HU8 199 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 HINT2Q9BX68 163 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 C6orf62Q9GZU0 229 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 MRPL27Q9P0M9 148 aaKnown RBP3.49□□□□□ -1.85
SCAF11-214ENST00000550893 FLVCR2Q9UPI3 526 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
SCAF11-214ENST00000550893 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 TRAV25A0A0B4J276 109 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 IGHV3-66A0A0C4DH42 116 aa3.48□□□□□ -1.85
SCAF11-214ENST00000550893 K7EQG2 157 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms