RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 C8orf88P0DMB2 117 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PSMB8P28062 276 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PPT1P50897 306 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 RAB9AP51151 201 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SCGB2A2Q13296 93 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 RNF125Q96EQ8 232 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SLC25A2Q9BXI2 301 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SETXQ7Z333 2677 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 OR7C2O60412 319 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 GCHFRP30047 84 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PMS2P11Q13670 270 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 CBLN2Q8IUK8 224 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 Q8WTZ3 238 aa15.75■□□□□ 0.11
TNFRSF1A-205ENST00000534885 WI2-2373I1.2A0A1W2PRP0 233 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 OR2C1O95371 312 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IGHV3-11P01762 117 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SFTA3P0C7M3 94 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PSMB3P49720 205 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 OR5AU1Q8NGC0 362 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 USMG5Q96IX5 58 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SERTAD4Q9NUC0 356 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 MRPL27Q9P0M9 148 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 HIGD1AQ9Y241 93 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PUS1Q9Y606 427 aaKnown RBP eCLIP15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 NSD1Q96L73 2696 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 TGOLN2O43493 480 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SCGB2A1O75556 95 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IFNA1P01562 189 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 TAS2R45P59539 299 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 USF2Q15853 346 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 KHDC3LQ587J8 217 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 LEMD1Q68G75 181 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 GNB4Q9HAV0 340 aa15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 GAR1Q9NY12 217 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-205ENST00000534885 INAFM1C9JVW0 142 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PPP5D1E7EU14 171 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PAGE4O60829 102 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 TRBV12-3P01733 135 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 OR10J4P0C629 311 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 UBE2G2P60604 165 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 MANBALQ9NQG1 85 aa15.73■□□□□ 0.11
TNFRSF1A-205ENST00000534885 CLDN34H7C241 214 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PQLC2Q6ZP29 291 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SLC25A39Q9BZJ4 359 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 MLXQ9UH92 298 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 VAX2Q9UIW0 290 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IGHV3OR16-8A0A075B7F1 116 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 S100A12P80511 92 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 Q6ZSV7 163 aa15.72■□□□□ 0.11
TNFRSF1A-205ENST00000534885 HSPB1P04792 205 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PYYP10082 97 aa15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 KIAA0141Q14154 515 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF600Q6ZNG1 722 aa15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF418Q8TF45 676 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ATP6V0BQ99437 205 aa15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SLC35B3Q9H1N7 401 aa15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SMDT1Q9H4I9 107 aa15.71■□□□□ 0.11
TNFRSF1A-205ENST00000534885 SRP19P09132 144 aaKnown RBP15.71■□□□□ 0.1
TNFRSF1A-205ENST00000534885 SLC35B1P78383 322 aa15.71■□□□□ 0.1
TNFRSF1A-205ENST00000534885 MEF2BQ02080 365 aaPredicted RBP15.71■□□□□ 0.1
TNFRSF1A-205ENST00000534885 SAV1Q9H4B6 383 aaPredicted RBP15.71■□□□□ 0.1
TNFRSF1A-205ENST00000534885 A0A0G2JLM5 398 aa15.7■□□□□ 0.1
TNFRSF1A-205ENST00000534885 HILS1P60008 231 aa15.7■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CD81P60033 236 aa15.7■□□□□ 0.1
TNFRSF1A-205ENST00000534885 TEX38Q6PEX7 206 aa15.7■□□□□ 0.1
TNFRSF1A-205ENST00000534885 FN1P02751 2386 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-205ENST00000534885 RPLP1P05386 114 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 RNASE1P07998 156 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ZNF343Q6P1L6 599 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 TOMM20LQ6UXN7 152 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 LINC00518Q8N0U6 118 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CYB561D1Q8N8Q1 229 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 OR4X2Q8NGF9 303 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ZFAND3Q9H8U3 227 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 YTHDF2Q9Y5A9 579 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 TMEM89A2RUT3 159 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 SNRPCP09234 159 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ARL3P36405 182 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ATP5G3P48201 142 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CEBPGP53567 150 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 UBE2L3P68036 154 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 OR5B12Q96R08 314 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 PAXXQ9BUH6 204 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 OR51M1Q9H341 326 aa15.69■□□□□ 0.1
TNFRSF1A-205ENST00000534885 H3BRN7 92 aa15.68■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CST9LP1Q5W188 147 aa15.68■□□□□ 0.1
TNFRSF1A-205ENST00000534885 SHANK2-AS3Q9BTD1 123 aa15.68■□□□□ 0.1
TNFRSF1A-205ENST00000534885 TMEM167BQ9NRX6 74 aa15.68■□□□□ 0.1
TNFRSF1A-205ENST00000534885 F8P00451 2351 aa15.68■□□□□ 0.1
TNFRSF1A-205ENST00000534885 C11orf94C9JXX5 98 aa15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 FOXE3Q13461 319 aa15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 TAGLN2P37802 199 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 OR4F5Q8NH21 305 aa15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 FXYD5Q96DB9 178 aa15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 OR4F4Q96R69 305 aa15.67■□□□□ 0.1
TNFRSF1A-205ENST00000534885 CYSRT1A8MQ03 144 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 ELANEP08246 267 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 GP9P14770 177 aa15.66■□□□□ 0.1
TNFRSF1A-205ENST00000534885 RELQ04864 619 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms