RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 OR4E1P0C645 316 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 MIFP14174 115 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 C4BPBP20851 252 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 BTCP35070 178 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 EIF2B2P49770 351 aaKnown RBP8.16□□□□□ -1.1
SF3B2-208ENST00000529994 ZNF90Q03938 601 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 GAMTQ14353 236 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 SPANXN5Q5MJ07 72 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 GSG1LQ6UXU4 331 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 PPP1R14BQ96C90 147 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 NDUFA13Q9P0J0 144 aa8.16□□□□□ -1.1
SF3B2-208ENST00000529994 SMCO3A2RU48 225 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 HELTA6NFD8 242 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 FAM90A26D6RGX4 464 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 K7EQG2 157 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 SSSCA1O60232 199 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 IFNA21P01568 189 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 SLC25A6P12236 298 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 POLR2GP62487 172 aaKnown RBP eCLIP8.15□□□□□ -1.1
SF3B2-208ENST00000529994 RPP30P78346 268 aaKnown RBP8.15□□□□□ -1.1
SF3B2-208ENST00000529994 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 C12orf74Q32Q52 190 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 PSMG4Q5JS54 123 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 GLMPQ8WWB7 406 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 RNF125Q96EQ8 232 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 CIB3Q96Q77 187 aaPredicted RBP8.15□□□□□ -1.1
SF3B2-208ENST00000529994 NDUFAF3Q9BU61 184 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 X6R8D5 127 aa8.15□□□□□ -1.1
SF3B2-208ENST00000529994 IGKV1D-37A0A075B6S9 117 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 GPX4P36969 197 aaPredicted RBP8.14□□□□□ -1.11
SF3B2-208ENST00000529994 ACTL10Q5JWF8 245 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 SIGLEC15Q6ZMC9 328 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 DCANP1Q8TF63 244 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 C7orf50Q9BRJ6 194 aaKnown RBP8.14□□□□□ -1.11
SF3B2-208ENST00000529994 C20orf85Q9H1P6 137 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 TBC1D24Q9ULP9 559 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 STRAPQ9Y3F4 350 aaKnown RBP8.14□□□□□ -1.11
SF3B2-208ENST00000529994 U3KQE9 123 aa8.14□□□□□ -1.11
SF3B2-208ENST00000529994 ZNF705EA8MWA4 302 aaPredicted RBP8.13□□□□□ -1.11
SF3B2-208ENST00000529994 CCSO14618 274 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 LYRM1O43325 122 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 FABP1P07148 127 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 NKX2-1P43699 371 aaPredicted RBP8.13□□□□□ -1.11
SF3B2-208ENST00000529994 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
SF3B2-208ENST00000529994 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 TRPT1Q86TN4 253 aaKnown RBP8.13□□□□□ -1.11
SF3B2-208ENST00000529994 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
SF3B2-208ENST00000529994 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 PLA2G10O15496 165 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 BUB3O43684 328 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 CCNKO75909 580 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 GATA2P23769 480 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-208ENST00000529994 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-208ENST00000529994 RRAS2P62070 204 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-208ENST00000529994 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
SF3B2-208ENST00000529994 Q6ZR54 194 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 OR4D5Q8NGN0 318 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 TRGV9Q99603 122 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 SEC22CQ9BRL7 303 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 NRN1Q9NPD7 142 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
SF3B2-208ENST00000529994 IGKV1OR2-108A0A075B7D4 117 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 SNRPGP15A8MWD9 76 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 C16orf90A8MZG2 172 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 SPP1P10451 314 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 NUP62P37198 522 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-208ENST00000529994 DEFB1P60022 68 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 SNRPD3P62318 126 aaKnown RBP8.11□□□□□ -1.11
SF3B2-208ENST00000529994 TMEM41BQ5BJD5 291 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 MORN3Q6PF18 240 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-208ENST00000529994 ZBTB8BQ8NAP8 495 aaPredicted RBP8.11□□□□□ -1.11
SF3B2-208ENST00000529994 LINC00052Q96N35 136 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 SLC25A22Q9H936 323 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 NUDT15Q9NV35 164 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 DOK5Q9P104 306 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 PFDN2Q9UHV9 154 aa8.11□□□□□ -1.11
SF3B2-208ENST00000529994 PRSS46E5RG02 174 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 IGKV3-20P01619 116 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 TCRBP04435 133 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 ORM2P19652 201 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 ID3Q02535 119 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 ZNF846Q147U1 533 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 SOHLH1Q5JUK2 328 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 OR8I2Q8N0Y5 310 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 THAP8Q8NA92 274 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 CSNK1G2-AS1Q8NCQ2 148 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 BPIFCQ8NFQ6 507 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
SF3B2-208ENST00000529994 RCL1Q9Y2P8 373 aaKnown RBP8.1□□□□□ -1.11
SF3B2-208ENST00000529994 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms