RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 IGHG2P01859 326 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 SLC25A5P05141 298 aaKnown RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 CTLA4P16410 223 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 RPS4Y1P22090 263 aaKnown RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 FKBP2P26885 142 aaKnown RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 PFN2P35080 140 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 OPRM1P35372 400 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 LPAR6P43657 344 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 INPP1P49441 399 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 FOXA3P55318 350 aaPredicted RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 LIM2P55344 173 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 H2BFSP57053 126 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 TAS2R46P59540 309 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 PPP1CBP62140 327 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 HLA-DRB3P79483 266 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 Q499Y3 187 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 MPV17L2Q567V2 206 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 SPRNQ5BIV9 151 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 PAGE3Q5JUK9 113 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 FAM201AQ5SY85 155 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 VKORC1L1Q8N0U8 176 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 CT55Q8WUE5 264 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 KLK6Q92876 244 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 FGF14Q92915 247 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 BORCS7Q96B45 105 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 DPH3Q96FX2 82 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 SLC25A44Q96H78 314 aaPredicted RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 GPR21Q99679 349 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 FOXC2Q99958 501 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 SLC25A21Q9BQT8 299 aaPredicted RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 AIG1Q9NVV5 245 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 MARCOQ9UEW3 520 aaPredicted RBP2.45□□□□□ -2.02
CD44-217ENST00000525348 OR5V1Q9UGF6 321 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 AK3Q9UIJ7 227 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 MPC1Q9Y5U8 109 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 TRIOBPQ9H2D6 2365 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 MCM3APO60318 1980 aa2.45□□□□□ -2.02
CD44-217ENST00000525348 MKI67P46013 3256 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 PLXNA1Q9UIW2 1896 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TRAV5A0A0B4J249 113 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TRAV26-2A0A0B4J265 109 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 CCL15-CCL14A0A0B4J2E2 113 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 A0A0D9SFI3 127 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TCRBV9S1A1TA0A576 114 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 ARRDC5A6NEK1 342 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TLCD2A6NGC4 264 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 E9PLD3 99 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TMEM262E9PQX1 116 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 F8W1H4 67 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 PTHP01270 115 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 HLA-DRB1P01911 266 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 P0DMU3 169 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 FAM231AP0DMU4 169 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 FAM231CP0DMU5 169 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 FGF6P10767 208 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TPT1P13693 172 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 PSMB8P28062 276 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 CCR2P41597 374 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 CA7P43166 264 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 PPICP45877 212 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 FABP6P51161 128 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 INSL3P51460 131 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 APOC4P55056 127 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TAS2R19P59542 299 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SEC11AP67812 179 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SRYQ05066 204 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 LOXL1Q08397 574 aaPredicted RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 DAZ2Q13117 558 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 C1DQ13901 141 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 EBI3Q14213 229 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 WFDC2Q14508 124 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TCEAL5Q5H9L2 206 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 DPPA3Q6W0C5 159 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 Q6ZS92 163 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SPATA12Q7Z6I5 190 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TMEM150AQ86TG1 271 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SGPP2Q8IWX5 399 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 TMEM256Q8N2U0 113 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 C3orf22Q8N5N4 141 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 C3orf56Q8N813 242 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 OTOSQ8NHW6 89 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 ZNF502Q8TBZ5 544 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 C18orf32Q8TCD1 76 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 LINC00526Q96FQ7 95 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 FMC1Q96HJ9 113 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 ZNF670Q9BS34 389 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 GNB1LQ9BYB4 327 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 PLA2G2FQ9BZM2 168 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 GABARAPL1Q9H0R8 117 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SLC35B3Q9H1N7 401 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SMDT1Q9H4I9 107 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 DAZ3Q9NR90 486 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 KLK12Q9UKR0 248 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 LSM2Q9Y333 95 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 HEBP2Q9Y5Z4 205 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 NINQ8N4C6 2090 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 DDX60LQ5H9U9 1706 aaKnown RBP2.44□□□□□ -2.02
CD44-217ENST00000525348 MIA3Q5JRA6 1907 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms