RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CLECL1Q8IZS7 167 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 CHMP6Q96FZ7 201 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 TMEM133Q9H2Q1 129 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 OPTCQ9UBM4 332 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 KDM6AO15550 1401 aaPredicted RBP0.7□□□□□ -2.3
CD46-218ENST00000496723 TNS3Q68CZ2 1445 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 ZFC3H1O60293 1989 aaKnown RBP0.7□□□□□ -2.3
CD46-218ENST00000496723 FAM159BA6NKW6 160 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 HMGB3O15347 200 aaKnown RBP0.69□□□□□ -2.3
CD46-218ENST00000496723 NDUFB3O43676 98 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 TIMM17BO60830 172 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 DHFRP00374 187 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 CST2P09228 141 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 RNASE4P34096 147 aaKnown RBP0.69□□□□□ -2.3
CD46-218ENST00000496723 SERPINB9P50453 376 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 CNBPP62633 177 aaKnown RBP0.69□□□□□ -2.3
CD46-218ENST00000496723 DYNLT1P63172 113 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 RRN3P1Q2M238 152 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 GOLT1AQ6ZVE7 132 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 OR10X1Q8NGY0 326 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 BORCS5Q969J3 196 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 GPER1Q99527 375 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 PHB2Q99623 299 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 IMUPQ9GZP8 106 aa0.69□□□□□ -2.3
CD46-218ENST00000496723 GGCTO75223 188 aaKnown RBP0.68□□□□□ -2.3
CD46-218ENST00000496723 ATP5G3P48201 142 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 MYL5Q02045 173 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 C22orf39Q6P5X5 142 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 ST6GALNAC3Q8NDV1 305 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 OR2T35Q8NGX2 323 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 C9orf16Q9BUW7 83 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 ASCC3Q8N3C0 2202 aaKnown RBP0.68□□□□□ -2.3
CD46-218ENST00000496723 MYH3P11055 1940 aa0.68□□□□□ -2.3
CD46-218ENST00000496723 MIA2Q96PC5 1412 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 A8MWV9 139 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 CST8O60676 142 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
CD46-218ENST00000496723 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
CD46-218ENST00000496723 HSD11B1P28845 292 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 HSPE1P61604 102 aaKnown RBP0.67□□□□□ -2.3
CD46-218ENST00000496723 UBE2BP63146 152 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 SLC25A21Q9BQT8 299 aaPredicted RBP0.67□□□□□ -2.3
CD46-218ENST00000496723 TMEM126AQ9H061 195 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 ARMC1Q9NVT9 282 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 CNTRLQ7Z7A1 2325 aa0.67□□□□□ -2.3
CD46-218ENST00000496723 N4BP2Q86UW6 1770 aaPredicted RBP0.67□□□□□ -2.3
CD46-218ENST00000496723 UNC13CQ8NB66 2214 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 ARHGEF11O15085 1522 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 TCRBV4S1A1TA0A5B7 111 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 TAX1BP3O14907 124 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 DNAL4O96015 105 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 CYBAP13498 195 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 MRPS15P82914 257 aaKnown RBP0.66□□□□□ -2.3
CD46-218ENST00000496723 TAF1AQ15573 450 aaPredicted RBP0.66□□□□□ -2.3
CD46-218ENST00000496723 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 STAG3L4Q8TBR4 150 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 CANT1Q8WVQ1 401 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 PATE1Q8WXA2 126 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 DGCR14Q96DF8 476 aaKnown RBP0.66□□□□□ -2.3
CD46-218ENST00000496723 CEP19Q96LK0 163 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 TP53RKQ96S44 253 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 AMELYQ99218 206 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 TMEM14CQ9P0S9 112 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 ARL5AQ9Y689 179 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 LY96Q9Y6Y9 160 aa0.66□□□□□ -2.3
CD46-218ENST00000496723 ADGRL3Q9HAR2 1447 aa0.65□□□□□ -2.3
CD46-218ENST00000496723 MED12Q93074 2177 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 TRBV6-4A0A1B0GX49 114 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 CCL16O15467 120 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 BANF1O75531 89 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 Q8IYB0 196 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 OR5D14Q8NGL3 314 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 OR10K1Q8NGX5 313 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 ORMDL1Q9P0S3 153 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 PYCARDQ9ULZ3 195 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 FANCMQ8IYD8 2048 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 NCAPD3P42695 1498 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 PIK3C2AO00443 1686 aa0.65□□□□□ -2.31
CD46-218ENST00000496723 ZGRF1Q86YA3 2104 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 C17orf112F2Z3M2 114 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 G3V2T6 193 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 TMEM256-PLSCR3K7ERE1 68 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 AIPO00170 330 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 NCR3O14931 201 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 CCL25O15444 150 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 ATP5HO75947 161 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 ATG12O94817 140 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 NDUFC2O95298 119 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 CAPZBP47756 277 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 NCALDP61601 193 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 EIF5AL1Q6IS14 154 aaKnown RBP0.64□□□□□ -2.31
CD46-218ENST00000496723 LINC00322Q6ZN03 302 aaPredicted RBP0.64□□□□□ -2.31
CD46-218ENST00000496723 IFT20Q8IY31 132 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 PXT1Q8NFP0 134 aa0.64□□□□□ -2.31
CD46-218ENST00000496723 ZNF431Q8TF32 576 aaPredicted RBP0.64□□□□□ -2.31
CD46-218ENST00000496723 TAS2R7Q9NYW3 318 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms