RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TRAV12-2A0A075B6T6 113 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 IGHV4OR15-8A0A075B7B6 117 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 SLC25A5P05141 298 aaKnown RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 ZNF90Q03938 601 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 ADIGQ0VDE8 80 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 UBE2NLQ5JXB2 153 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 FP248Q71RG6 208 aaPredicted RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 FAM168AQ92567 244 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 MYH1P12882 1939 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 IGHV1-45A0A0A0MS14 117 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 A0A0J9YW62 118 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 CCL20P78556 96 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 ZNF705AQ6ZN79 300 aaPredicted RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 RAB2BQ8WUD1 216 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 ATG5Q9H1Y0 275 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 A0A1B0GUL6 1792 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 TRAV13-1A0A0B4J241 112 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 IRGMA1A4Y4 181 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 ZNF14P17017 642 aaPredicted RBP2.85□□□□□ -1.95
UBR3-206ENST00000444475 PROK1P58294 105 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 DSCR9P59020 149 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 Q8N7P7 452 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 WFDC11Q8NEX6 87 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 OR4X2Q8NGF9 303 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 BANF2Q9H503 90 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 BCL2L10Q9HD36 194 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 AIG1Q9NVV5 245 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 BET1LQ9NYM9 111 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 KLK13Q9UKR3 277 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 ZNF835Q9Y2P0 537 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 COL4A5P29400 1685 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 CHD3Q12873 2000 aaKnown RBP2.85□□□□□ -1.95
UBR3-206ENST00000444475 MUC21A0A0G2JKD1 596 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 TRBV27A0A0K0K1C4 114 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 YPEL1O60688 119 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 CST7O76096 145 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 HRASP01112 189 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 PYYP10082 97 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 ICAM4Q14773 271 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
UBR3-206ENST00000444475 Q6ZS92 163 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 NEUROG1Q92886 237 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 TSLPQ969D9 159 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 YPEL2Q96QA6 119 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 S100A13Q99584 98 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 SHANK2-AS3Q9BTD1 123 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 SEC11CQ9BY50 192 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 DUOX1Q9NRD9 1551 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 MON2Q7Z3U7 1717 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 RPL37AP8A6NKH3 93 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 K7EP34 96 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 SOD1P00441 154 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 HLA-DPB1P04440 258 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 LGALS3P17931 250 aaKnown RBP2.85□□□□□ -1.95
UBR3-206ENST00000444475 C9orf66Q5T8R8 295 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 VAMP8Q9BV40 100 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 SMCO4Q9NRQ5 59 aa2.85□□□□□ -1.95
UBR3-206ENST00000444475 KMT2BQ9UMN6 2715 aaPredicted RBP2.85□□□□□ -1.95
UBR3-206ENST00000444475 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 EIF5AP63241 154 aaKnown RBP2.84□□□□□ -1.95
UBR3-206ENST00000444475 AADACL3Q5VUY0 350 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 LYPD2Q6UXB3 125 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 H2AFVQ71UI9 128 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 MORN4Q8NDC4 146 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 B9D2Q9BPU9 175 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 CD163L1Q9NR16 1453 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 IGHV4-4A0A075B6R2 117 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 IGHV3-35A0A0C4DH35 117 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 IGLV5-39A0A0G2JS06 123 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 UBE2L6O14933 153 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 BGLAPP02818 100 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 CXCL1P09341 107 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 LMO2P25791 158 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 TMEM155Q4W5P6 130 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 LINC01554Q52M75 96 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 EIF5AL1Q6IS14 154 aaKnown RBP2.84□□□□□ -1.95
UBR3-206ENST00000444475 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
UBR3-206ENST00000444475 ZNF497Q6ZNH5 498 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 C3orf56Q8N813 242 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 ZNF709Q8N972 641 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 LINC00301Q8NCQ3 95 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 TWIST2Q8WVJ9 160 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 ATXN7L3BQ96GX2 97 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 LINC00597Q9H2U6 94 aa2.84□□□□□ -1.95
UBR3-206ENST00000444475 COL11A2P13942 1736 aaPredicted RBP2.84□□□□□ -1.96
UBR3-206ENST00000444475 IGKV1-6A0A0C4DH72 117 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 SEC11BP0C7V7 166 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 HES1Q14469 280 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 Q56UQ5 140 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 ZNF645Q8N7E2 425 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 ATP6V0E2Q8NHE4 81 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 MAL2Q969L2 176 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 TMEM106BQ9NUM4 274 aa2.84□□□□□ -1.96
UBR3-206ENST00000444475 TICRRQ7Z2Z1 1910 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 COL1A2P08123 1366 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 NDUFC2-KCTD14E9PQ53 114 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 H3BT86 120 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms