RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PRB4P10163 310 aaPredicted RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 ERHP84090 104 aaKnown RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 LINC01545Q5VT33 79 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 CACNG8Q8WXS5 425 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 ZNF430Q9H8G1 570 aaPredicted RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 HILPDAQ9Y5L2 63 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 CUL9Q8IWT3 2517 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 H3BUT2 72 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 TMEM116Q8NCL8 245 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 NDFIP1Q9BT67 221 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 IGKV1D-37A0A075B6S9 117 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 AP1S3Q96PC3 154 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 PLXNB1O43157 2135 aa16.31■□□□□ 0.2
SHOX2-203ENST00000441443 TRAV8-1A0A0A6YYK1 113 aa16.3■□□□□ 0.2
SHOX2-203ENST00000441443 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
SHOX2-203ENST00000441443 NEU4Q8WWR8 484 aaPredicted RBP16.3■□□□□ 0.2
SHOX2-203ENST00000441443 RUSC1-AS1Q66K80 236 aa16.3■□□□□ 0.2
SHOX2-203ENST00000441443 HARBI1Q96MB7 349 aa16.3■□□□□ 0.2
SHOX2-203ENST00000441443 NDUFA4L2Q9NRX3 87 aa16.3■□□□□ 0.2
SHOX2-203ENST00000441443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.29■□□□□ 0.2
SHOX2-203ENST00000441443 C19orf71A6NCJ1 209 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 APOHP02749 345 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-203ENST00000441443 UFSP1Q6NVU6 142 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 KLF12Q9Y4X4 402 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 SPRY3O43610 288 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 WT1-ASQ06250 92 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 PIP4P1Q86T03 277 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 NBEAP1P0C6P0 100 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 CIARTQ8N365 385 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-203ENST00000441443 RAB37Q96AX2 223 aa16.29■□□□□ 0.2
SHOX2-203ENST00000441443 IGHG3P01860 377 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 BHLHA15Q7RTS1 189 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-203ENST00000441443 RABAC1Q9UI14 185 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 COL8A1P27658 744 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 ATP5IP56385 69 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-203ENST00000441443 SEC11AP67812 179 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 GUSBP1Q15486 140 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 GTF2H5Q6ZYL4 71 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 SOX21Q9Y651 276 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-203ENST00000441443 ABCA1O95477 2261 aa16.28■□□□□ 0.2
SHOX2-203ENST00000441443 TLN1Q9Y490 2541 aaKnown RBP16.28■□□□□ 0.2
SHOX2-203ENST00000441443 IGHV1-18A0A0C4DH31 117 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 ASCL2Q99929 193 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 ZNF747Q9BV97 191 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 AP5S1Q9NUS5 200 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 LTAP01374 205 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 PAX2Q02962 417 aa16.27■□□□□ 0.2
SHOX2-203ENST00000441443 MBNL2Q5VZF2 373 aaKnown RBP16.27■□□□□ 0.2
SHOX2-203ENST00000441443 MRPL20Q9BYC9 149 aaKnown RBP16.27■□□□□ 0.2
SHOX2-203ENST00000441443 DSCAML1Q8TD84 2053 aa16.27■□□□□ 0.19
SHOX2-203ENST00000441443 G3V4G9 280 aa16.27■□□□□ 0.19
SHOX2-203ENST00000441443 TMEM11P17152 192 aa16.27■□□□□ 0.19
SHOX2-203ENST00000441443 PROCRQ9UNN8 238 aa16.27■□□□□ 0.19
SHOX2-203ENST00000441443 FAM106CPP0CH98 169 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 FAM106AQ4KMX7 169 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 CT83Q5H943 113 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 OR8A1Q8NGG7 326 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 FLYWCH2Q96CP2 140 aaKnown RBP16.26■□□□□ 0.19
SHOX2-203ENST00000441443 C9orf118A6NHY6 69 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 PRR33A8MZF0 331 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 MZT1Q08AG7 82 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 C5orf17Q8NAS9 161 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 TANC2Q9HCD6 1990 aa16.26■□□□□ 0.19
SHOX2-203ENST00000441443 IGHV3-21A0A0B4J1V1 117 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 TCRAP04437 139 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 FAM87AP0C7U9 286 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 CLEC2AQ6UVW9 174 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 CCL13Q99616 98 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 M0R1B8 84 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 FGF6P10767 208 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 FAM216BQ8N7L0 139 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 FMC1Q96HJ9 113 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 Q9H3A6 140 aa16.25■□□□□ 0.19
SHOX2-203ENST00000441443 hADV38S2A0JD32 116 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 CGB1A6NKQ9 187 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 SLC25A48Q6ZT89 311 aaKnown RBP16.24■□□□□ 0.19
SHOX2-203ENST00000441443 PRSS3P2Q8NHM4 247 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 PERPQ96FX8 193 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 ARMS2P0C7Q2 107 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 KIR3DS1Q14943 382 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 GFRA4Q9GZZ7 299 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 ZNF492Q9P255 531 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 C22orf46C9J442 243 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 APELAP0DMC3 54 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 FXYD7P58549 80 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 OR10AG1Q8NH19 301 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 DKK4Q9UBT3 224 aa16.24■□□□□ 0.19
SHOX2-203ENST00000441443 A0A0G2JLM5 398 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 LOXL1Q08397 574 aaPredicted RBP16.23■□□□□ 0.19
SHOX2-203ENST00000441443 FA2HQ7L5A8 372 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 PRNTQ86SH4 94 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 ZADH2Q8N4Q0 377 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 TPPP3Q9BW30 176 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 RAB9BQ9NP90 201 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 H3BRM9 83 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 HAX1O00165 279 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 GOSR1O95249 250 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 OR1N2Q8NGR9 330 aa16.23■□□□□ 0.19
SHOX2-203ENST00000441443 OR2K2Q8NGT1 345 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms