RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SPART-AS1P0CW21 52 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 P0DMU3 169 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 FAM231AP0DMU4 169 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 FAM231CP0DMU5 169 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 TNFSF8P32971 234 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 GPX4P36969 197 aaPredicted RBP12.93□□□□□ -0.34
GTF3A-204ENST00000438571 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
GTF3A-204ENST00000438571 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 TRIM63Q969Q1 353 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 SLC25A32Q9H2D1 315 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 DKK2Q9UBU2 259 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 CACFD1Q9UGQ2 172 aa12.93□□□□□ -0.34
GTF3A-204ENST00000438571 PAIP2BQ9ULR5 123 aaKnown RBP12.93□□□□□ -0.34
GTF3A-204ENST00000438571 IGLV2-18A0A075B6J9 118 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 GATA2P23769 480 aaPredicted RBP12.92□□□□□ -0.34
GTF3A-204ENST00000438571 FAM78BQ5VT40 261 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
GTF3A-204ENST00000438571 THAP8Q8NA92 274 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 PPP1R14BQ96C90 147 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 SCGB3A2Q96PL1 93 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 TRGV9Q99603 122 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
GTF3A-204ENST00000438571 RSL24D1Q9UHA3 163 aaKnown RBP12.92□□□□□ -0.34
GTF3A-204ENST00000438571 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 RFNGQ9Y644 331 aa12.92□□□□□ -0.34
GTF3A-204ENST00000438571 A0A0J9YX75 114 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 PRSS29PA6NIE9 313 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 PRSS46E5RG02 174 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 ANXA3P12429 323 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 HTN3P15516 51 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 ID1P41134 155 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 PAX9P55771 341 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
GTF3A-204ENST00000438571 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 SMIM9A6NGZ8 99 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 H3BMQ9 156 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 PRM2P04554 102 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 SRPXP78539 464 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 PSG9Q00887 426 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 SLC25A22Q9H936 323 aa12.9□□□□□ -0.34
GTF3A-204ENST00000438571 YTHDF2Q9Y5A9 579 aaKnown RBP12.9□□□□□ -0.34
GTF3A-204ENST00000438571 LOC102723971A0A1B0GUV8 181 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 ISLRO14498 428 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 VAMP1P23763 118 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 TMBIM6P55061 237 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
GTF3A-204ENST00000438571 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 H3BP45 60 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 WRBO00258 174 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 ATP5IP56385 69 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-204ENST00000438571 RAB11AP62491 216 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 EBLN2Q6P2I7 272 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 UBE2DNLQ8IWF7 75 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
GTF3A-204ENST00000438571 PFDN2Q9UHV9 154 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 GOLT1BQ9Y3E0 138 aa12.88□□□□□ -0.35
GTF3A-204ENST00000438571 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 A8MTW9 85 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 HBE1P02100 147 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 FABP1P07148 127 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
GTF3A-204ENST00000438571 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 TMEM128Q5BJH2 165 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 BCL7BQ9BQE9 202 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 RPRMQ9NS64 109 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 DOK5Q9P104 306 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 V9GYH0 126 aa12.87□□□□□ -0.35
GTF3A-204ENST00000438571 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
GTF3A-204ENST00000438571 SFT2D2O95562 160 aa12.86□□□□□ -0.35
GTF3A-204ENST00000438571 HOXB5P09067 269 aa12.86□□□□□ -0.35
GTF3A-204ENST00000438571 Q6ZR54 194 aa12.86□□□□□ -0.35
GTF3A-204ENST00000438571 M0R2Z0 102 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 CRXO43186 299 aaPredicted RBP12.85□□□□□ -0.35
GTF3A-204ENST00000438571 SYNGR2O43760 224 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 ORM2P19652 201 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 RRN3P1Q2M238 152 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 PYDC2Q56P42 97 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 SPANXN5Q5MJ07 72 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
GTF3A-204ENST00000438571 HSPG2P98160 4391 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms