RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
GPC1-203ENST00000425056 TRGV9Q99603 122 aa12.73□□□□□ -0.37
GPC1-203ENST00000425056 HERC2O95714 4834 aa12.73□□□□□ -0.37
GPC1-203ENST00000425056 SNRPGP15A8MWD9 76 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 SLC25A6P12236 298 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 ID1P41134 155 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 AP3S2P59780 193 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 TMED4Q7Z7H5 227 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 CCDC32Q9BV29 185 aa12.72□□□□□ -0.37
GPC1-203ENST00000425056 IGKV1OR2-108A0A075B7D4 117 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 TMEM189A5PLL7 270 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 SMIM9A6NGZ8 99 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 IAPPP10997 89 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 RAB11AP62491 216 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 THAP8Q8NA92 274 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 COQ8AQ8NI60 647 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 DEDD2Q8WXF8 326 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
GPC1-203ENST00000425056 ISLRO14498 428 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 IGKV3-20P01619 116 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 INPP1P49441 399 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 PAX9P55771 341 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 OR2F1Q13607 317 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 TRIQKQ629K1 86 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 TOMM5Q8N4H5 51 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 SCRT1Q9BWW7 348 aa12.7□□□□□ -0.38
GPC1-203ENST00000425056 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 MED6O75586 246 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 SPART-AS1P0CW21 52 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 VAMP1P23763 118 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 FXYD7P58549 80 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 OR8I2Q8N0Y5 310 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 PPP1R14BQ96C90 147 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
GPC1-203ENST00000425056 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
GPC1-203ENST00000425056 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
GPC1-203ENST00000425056 TMED3Q9Y3Q3 217 aa12.69□□□□□ -0.38
GPC1-203ENST00000425056 CFDP00746 253 aaPredicted RBP12.68□□□□□ -0.38
GPC1-203ENST00000425056 P0DMU3 169 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 IL7P13232 177 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 MEOX2P50222 304 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 LINC00336Q6ZUF6 198 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 OR4B1Q8NGF8 309 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
GPC1-203ENST00000425056 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 RFNGQ9Y644 331 aa12.68□□□□□ -0.38
GPC1-203ENST00000425056 IGHV3OR16-12A0A075B7B8 117 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 A0A0J9YX75 114 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 SYNGR2O43760 224 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 SFT2D2O95562 160 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 RPP30P78346 268 aaKnown RBP12.67□□□□□ -0.38
GPC1-203ENST00000425056 PPP1R1AQ13522 171 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 BAK1Q16611 211 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 GGNBP1Q5YKI7 109 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 KRTAP17-1Q9BYP8 105 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 SLC25A32Q9H2D1 315 aa12.67□□□□□ -0.38
GPC1-203ENST00000425056 FAT2Q9NYQ8 4349 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 A8MTW9 85 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 F6UB75 175 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 GALR1P47211 349 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 EMP1P54849 157 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 PSG9Q00887 426 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 FAM78BQ5VT40 261 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 GSG1LQ6UXU4 331 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
GPC1-203ENST00000425056 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 WRBO00258 174 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 FAM210BQ96KR6 192 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 GOLT1BQ9Y3E0 138 aa12.65□□□□□ -0.38
GPC1-203ENST00000425056 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 CENPXA8MT69 81 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 UPK1BO75841 260 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 HOXB5P09067 269 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 C7orf50Q9BRJ6 194 aaKnown RBP12.64□□□□□ -0.39
GPC1-203ENST00000425056 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 SLC25A22Q9H936 323 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 DOK5Q9P104 306 aa12.64□□□□□ -0.39
GPC1-203ENST00000425056 KIAA1109Q2LD37 5005 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 HBE1P02100 147 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms