RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LYZP61626 148 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 NEU1Q99519 415 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 TEX48A0A1B0GUV7 120 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 NAP1L6A6NFF2 107 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 SPART-AS1P0CW21 52 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 PSMB3P49720 205 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 FXYD7P58549 80 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
COL18A1-205ENST00000423214 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 POM121L12Q8N7R1 296 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 MAGT1Q9H0U3 335 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 SAV1Q9H4B6 383 aaPredicted RBP11.59□□□□□ -0.55
COL18A1-205ENST00000423214 PAIP2BQ9ULR5 123 aaKnown RBP11.59□□□□□ -0.55
COL18A1-205ENST00000423214 PKHD1P08F94 4074 aa11.59□□□□□ -0.55
COL18A1-205ENST00000423214 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 PIGBOS1A0A0B4J2F0 54 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 C9orf170A2RU37 121 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-205ENST00000423214 NDUFB6O95139 128 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-205ENST00000423214 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
COL18A1-205ENST00000423214 GGNBP1Q5YKI7 109 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 NDUFA13Q9P0J0 144 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 TMED3Q9Y3Q3 217 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 RFNGQ9Y644 331 aa11.58□□□□□ -0.56
COL18A1-205ENST00000423214 FAT2Q9NYQ8 4349 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 WRBO00258 174 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 ADAP1O75689 374 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 IL7P13232 177 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
COL18A1-205ENST00000423214 ATP5IP56385 69 aaPredicted RBP11.57□□□□□ -0.56
COL18A1-205ENST00000423214 DEFB1P60022 68 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 RAB11AP62491 216 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 ZNF90Q03938 601 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 GAMTQ14353 236 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 WDR12Q9GZL7 423 aaKnown RBP11.57□□□□□ -0.56
COL18A1-205ENST00000423214 GOLT1BQ9Y3E0 138 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 KIAA1109Q2LD37 5005 aa11.57□□□□□ -0.56
COL18A1-205ENST00000423214 CENPXA8MT69 81 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 M0R2N4 97 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 SLC25A6P12236 298 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 BTCP35070 178 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
COL18A1-205ENST00000423214 C1orf194Q5T5A4 169 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 SAMD13Q5VXD3 122 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 SPATA31B1PQ5VZV4 182 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
COL18A1-205ENST00000423214 C7orf50Q9BRJ6 194 aaKnown RBP11.56□□□□□ -0.56
COL18A1-205ENST00000423214 DNAH2Q9P225 4427 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 IGKV1D-37A0A075B6S9 117 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 ISLRO14498 428 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 SYNGR2O43760 224 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 MED6O75586 246 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 IFNA21P01568 189 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 OR4E1P0C645 316 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
COL18A1-205ENST00000423214 OR2F1Q13607 317 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 MUC4Q99102 2169 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 PCLOQ9Y6V0 5065 aa11.55□□□□□ -0.56
COL18A1-205ENST00000423214 PRSS29PA6NIE9 313 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 SOCS3O14543 225 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 PLA2G10O15496 165 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 HBE1P02100 147 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 HTN3P15516 51 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 MEOX2P50222 304 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 C4orf46Q504U0 113 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 ZNF709Q8N972 641 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 CLUHP3Q96NS8 147 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 TRGV9Q99603 122 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
COL18A1-205ENST00000423214 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 H3BP45 60 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 GALR1P47211 349 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 PAX9P55771 341 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 PSG9Q00887 426 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 SPANXN5Q5MJ07 72 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 FAM78BQ5VT40 261 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 C16orf92Q96LL3 132 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
COL18A1-205ENST00000423214 A0A0J9YX75 114 aa11.52□□□□□ -0.57
COL18A1-205ENST00000423214 A0A1B0GVY2 172 aa11.52□□□□□ -0.57
COL18A1-205ENST00000423214 F6UB75 175 aa11.52□□□□□ -0.57
COL18A1-205ENST00000423214 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL18A1-205ENST00000423214 RRN3P1Q2M238 152 aa11.52□□□□□ -0.57
COL18A1-205ENST00000423214 LGALS9BQ3B8N2 356 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms