RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
CXCL12-206ENST00000395795 ID3Q02535 119 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 C1orf194Q5T5A4 169 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF709Q8N972 641 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 TBC1D24Q9ULP9 559 aa11.64□□□□□ -0.55
CXCL12-206ENST00000395795 UBE2MP61081 183 aaKnown RBP11.63□□□□□ -0.55
CXCL12-206ENST00000395795 LYZP61626 148 aa11.63□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF705AQ6ZN79 300 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-206ENST00000395795 Q6ZTC4 211 aa11.63□□□□□ -0.55
CXCL12-206ENST00000395795 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
CXCL12-206ENST00000395795 PIGBOS1A0A0B4J2F0 54 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-206ENST00000395795 SNRPGP15A8MWD9 76 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 WRBO00258 174 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 MED6O75586 246 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF705DP0CH99 300 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF705BP0CI00 300 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-206ENST00000395795 IL7P13232 177 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 GATA2P23769 480 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-206ENST00000395795 PAX9P55771 341 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 RAB11AP62491 216 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 OR4D5Q8NGN0 318 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 SCRT1Q9BWW7 348 aa11.62□□□□□ -0.55
CXCL12-206ENST00000395795 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-206ENST00000395795 A8MTW9 85 aa11.61□□□□□ -0.55
CXCL12-206ENST00000395795 H3BP45 60 aa11.61□□□□□ -0.55
CXCL12-206ENST00000395795 CCNKO75909 580 aa11.61□□□□□ -0.55
CXCL12-206ENST00000395795 NUP62P37198 522 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-206ENST00000395795 PSMB3P49720 205 aa11.61□□□□□ -0.55
CXCL12-206ENST00000395795 POLR2GP62487 172 aaKnown RBP eCLIP11.61□□□□□ -0.55
CXCL12-206ENST00000395795 CIB3Q96Q77 187 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-206ENST00000395795 SLC25A32Q9H2D1 315 aa11.61□□□□□ -0.55
CXCL12-206ENST00000395795 NAP1L6A6NFF2 107 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 CENPXA8MT69 81 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 F6UB75 175 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 SPANXN5Q5MJ07 72 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 ACOT7LQ6ZUV0 252 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 NEU1Q99519 415 aa11.6□□□□□ -0.55
CXCL12-206ENST00000395795 C7orf50Q9BRJ6 194 aaKnown RBP11.6□□□□□ -0.55
CXCL12-206ENST00000395795 PAIP2BQ9ULR5 123 aaKnown RBP11.6□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 PLA2G10O15496 165 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 OR4E1P0C645 316 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 ANXA7P20073 488 aaKnown RBP11.59□□□□□ -0.55
CXCL12-206ENST00000395795 TCTAP57738 103 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 FXYD7P58549 80 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 ZNF767PQ75MW2 155 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
CXCL12-206ENST00000395795 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 A0A0J9YX75 114 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 IGLL5B9A064 214 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 ISLRO14498 428 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 UPK1BO75841 260 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 IGKV3-20P01619 116 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 FABP1P07148 127 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 AMTNQ6UX39 209 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 LINC00052Q96N35 136 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 C1QTNF4Q9BXJ3 329 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
CXCL12-206ENST00000395795 LINC00854A0A1B0GVQ3 168 aa11.57□□□□□ -0.56
CXCL12-206ENST00000395795 CFDP00746 253 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-206ENST00000395795 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
CXCL12-206ENST00000395795 TMEM14EPQ6UXP3 125 aa11.57□□□□□ -0.56
CXCL12-206ENST00000395795 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
CXCL12-206ENST00000395795 PFDN2Q9UHV9 154 aa11.57□□□□□ -0.56
CXCL12-206ENST00000395795 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
CXCL12-206ENST00000395795 IGHV4-4A0A075B6R2 117 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 TRAV10A0A0B4J240 114 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 PLP1P60201 277 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
CXCL12-206ENST00000395795 ARL16Q0P5N6 197 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 FAM78BQ5VT40 261 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 RSG1Q9BU20 258 aa11.56□□□□□ -0.56
CXCL12-206ENST00000395795 RCL1Q9Y2P8 373 aaKnown RBP11.56□□□□□ -0.56
CXCL12-206ENST00000395795 H3BRN7 92 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 LYRM1O43325 122 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 ORM2P19652 201 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 ID1P41134 155 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 MITD1Q8WV92 249 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 RNF126Q9BV68 326 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
CXCL12-206ENST00000395795 K7EPK0 472 aa11.54□□□□□ -0.56
CXCL12-206ENST00000395795 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
CXCL12-206ENST00000395795 SSSCA1O60232 199 aa11.54□□□□□ -0.56
CXCL12-206ENST00000395795 AMBPP02760 352 aa11.54□□□□□ -0.56
CXCL12-206ENST00000395795 IFITM3Q01628 133 aa11.54□□□□□ -0.56
CXCL12-206ENST00000395795 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms