RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 PATE1Q8WXA2 126 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 LINC00526Q96FQ7 95 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 LINC00467Q9BRT7 94 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 PRADC1Q9BSG0 188 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 ENY2Q9NPA8 101 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 FAM32AQ9Y421 112 aaKnown RBP0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
RNU6-278P-201ENST00000390945 ZNF736B4DX44 427 aaPredicted RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 ZNF93P35789 620 aaPredicted RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 ROMO1P60602 79 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 TMED2Q15363 201 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 SOSTDC1Q6X4U4 206 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 FAM19A2Q8N3H0 131 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 SLC30A7Q8NEW0 376 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 DGCR14Q96DF8 476 aaKnown RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 C9orf16Q9BUW7 83 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 RASL12Q9NYN1 266 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 UTP11Q9Y3A2 253 aaKnown RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 ARL5AQ9Y689 179 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 CHD3Q12873 2000 aaKnown RBP0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 EML5Q05BV3 1969 aa0.75□□□□□ -2.29
RNU6-278P-201ENST00000390945 CD109Q6YHK3 1445 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 TRBV6-7A0A0A0MS04 114 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 M0R378 163 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 HMGB3O15347 200 aaKnown RBP0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 GADD45GO95257 159 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 IFNA7P01567 189 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 KRR1Q13601 381 aaKnown RBP0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 TAF1AQ15573 450 aaPredicted RBP0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 Q8N814 137 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 IMUPQ9GZP8 106 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 OPTCQ9UBM4 332 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 UNC13CQ8NB66 2214 aa0.74□□□□□ -2.29
RNU6-278P-201ENST00000390945 CEP164Q9UPV0 1460 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 KDM6AO15550 1401 aaPredicted RBP0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 TRGV10A0A0A0MS01 117 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 TMEM256-PLSCR3K7ERE1 68 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 TAX1BP3O14907 124 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 TIMM17BO60830 172 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 GGCTO75223 188 aaKnown RBP0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 DHFRP00374 187 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 RHOBP62745 196 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 PDZD9Q8IXQ8 264 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 YPEL2Q96QA6 119 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 MRPL57Q9BQC6 102 aaKnown RBP0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 ZFP30Q9Y2G7 519 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 CAMSAP2Q08AD1 1489 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 CECR2Q9BXF3 1484 aa0.73□□□□□ -2.29
RNU6-278P-201ENST00000390945 UHRF1BP1Q6BDS2 1440 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 B4DSR2 109 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 NDUFB3O43676 98 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 ATP5HO75947 161 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 SRP14P37108 136 aaKnown RBP0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 UBE2BP63146 152 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 GDF5OSQ5U4N7 250 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 PATE2Q6UY27 113 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 ZNF833PQ6ZTB9 187 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 CANT1Q8WVQ1 401 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 PYCARDQ9ULZ3 195 aa0.72□□□□□ -2.29
RNU6-278P-201ENST00000390945 RFX7Q2KHR2 1363 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 FANCMQ8IYD8 2048 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 A8MWV9 139 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 NCALDP61601 193 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 MPV17LQ2QL34 196 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 SPRNQ5BIV9 151 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 LYG2Q86SG7 212 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 EXOC3-AS1Q8N2X6 119 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 OR10K1Q8NGX5 313 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 C4orf3Q8WVX3 66 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 TEX37Q96LM6 180 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 PSTPIP2Q9H939 334 aa0.71□□□□□ -2.3
RNU6-278P-201ENST00000390945 SYNMO15061 1565 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 NUP210Q8TEM1 1887 aaPredicted RBP0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 A0A087WSZ3 146 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 TRBV6-4A0A1B0GX49 114 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 ATG12O94817 140 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 IGLV1-51P01701 117 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 MRPS25P82663 173 aaKnown RBP0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 BCL2L15Q5TBC7 163 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 SLC25A21Q9BQT8 299 aaPredicted RBP0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 GINS3Q9BRX5 216 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 PRNDQ9UKY0 176 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 PTPRDP23468 1912 aa0.7□□□□□ -2.3
RNU6-278P-201ENST00000390945 MGAMO43451 1857 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 CCDC160A6NGH7 325 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 CCL16O15467 120 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 SNRNP200O75643 2136 aaKnown RBP0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 DYNLT3P51808 116 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 DSCR4P56555 118 aaPredicted RBP0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 GRINAQ7Z429 371 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 TMEM254Q8TBM7 123 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 GPER1Q99527 375 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 PHB2Q99623 299 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 C6orf62Q9GZU0 229 aaPredicted RBP0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 SH3BGRL3Q9H299 93 aa0.69□□□□□ -2.3
RNU6-278P-201ENST00000390945 MED29Q9NX70 200 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms