RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 LINC00473A8K010 186 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 Q6P435 159 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 BRD3OSQ6XYD6 125 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 RNF138Q8WVD3 245 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 TMEM178BH3BS89 294 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 SMAGPQ0VAQ4 97 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 SCRT1Q9BWW7 348 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 LINC00312Q9Y6C7 94 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 A0A1W2PS18 150 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 FAM106CPP0CH98 169 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 OR10W1Q8NGF6 305 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 TMEM186Q96B77 213 aa15.43■□□□□ 0.06
CSPG5-202ENST00000383738 ZNF430Q9H8G1 570 aaPredicted RBP15.43■□□□□ 0.06
CSPG5-202ENST00000383738 PEF1Q9UBV8 284 aaKnown RBP15.43■□□□□ 0.06
CSPG5-202ENST00000383738 ORM1P02763 201 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 TMEM200BQ69YZ2 307 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 GOLT1AQ6ZVE7 132 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 OR4F17Q8NGA8 305 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 AP5S1Q9NUS5 200 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 TNRC6AQ8NDV7 1962 aaKnown RBP15.42■□□□□ 0.06
CSPG5-202ENST00000383738 C20orf144Q9BQM9 153 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 IGHV3-66A0A0C4DH42 116 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 C7orf71A4D174 169 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 CCL25O15444 150 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 SCGB1C2P0DMR2 95 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 FABP2P12104 132 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 C11orf44Q8N8P7 122 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 DPF1Q92782 380 aa15.42■□□□□ 0.06
CSPG5-202ENST00000383738 TRBV9A0A0B4J1U6 114 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 IGLC2P0DOY2 106 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 IGLC3P0DOY3 106 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 MGST2Q99735 147 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 APOHP02749 345 aaPredicted RBP15.41■□□□□ 0.06
CSPG5-202ENST00000383738 STAG3L2P0CL84 134 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 STAG3L3P0CL85 134 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 SEM1Q6ZVN7 128 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 RABAC1Q9UI14 185 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 COX11Q9Y6N1 276 aa15.41■□□□□ 0.06
CSPG5-202ENST00000383738 SAA1P0DJI8 122 aaPredicted RBP15.4■□□□□ 0.06
CSPG5-202ENST00000383738 ZNF788Q6ZQV5 615 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 BPESC1Q9GZL8 116 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 PRRC2AP48634 2157 aaKnown RBP15.4■□□□□ 0.06
CSPG5-202ENST00000383738 H3BVH4 76 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 TMEM219Q86XT9 240 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 TSKUQ8WUA8 353 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 NEU4Q8WWR8 484 aaPredicted RBP15.4■□□□□ 0.06
CSPG5-202ENST00000383738 KLK15Q9H2R5 256 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 AAMDCQ9H7C9 122 aa15.4■□□□□ 0.06
CSPG5-202ENST00000383738 DSCAML1Q8TD84 2053 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 NPPCP23582 126 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 DUTP33316 252 aaKnown RBP15.39■□□□□ 0.05
CSPG5-202ENST00000383738 HBBP68871 147 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 DNLZQ5SXM8 178 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 LINC00305Q7Z4B0 112 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 TIMM23O14925 209 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 CIDEAO60543 219 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 GAGE12BA1L429 117 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 IGHV3-11P01762 117 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 GNB1LQ9BYB4 327 aa15.39■□□□□ 0.05
CSPG5-202ENST00000383738 C15orf62A8K5M9 175 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 GPR183P32249 361 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 FGF23Q9GZV9 251 aaPredicted RBP15.38■□□□□ 0.05
CSPG5-202ENST00000383738 TMEM133Q9H2Q1 129 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 SPCS1Q9Y6A9 102 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 FRYLO94915 3013 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 TRAV8-6A0A0B4J262 113 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 TRAV40A0A0B4J280 105 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 C10orf142B7Z368 130 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 TYMSP04818 313 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 FCGR2BP31994 310 aaPredicted RBP15.38■□□□□ 0.05
CSPG5-202ENST00000383738 RIGQ13278 110 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 KLF17Q5JT82 389 aaPredicted RBP15.38■□□□□ 0.05
CSPG5-202ENST00000383738 LOC107984156A0A0G2JMH3 177 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 FAM181BA6NEQ2 426 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 ARL17AQ8IVW1 177 aa15.38■□□□□ 0.05
CSPG5-202ENST00000383738 IZUMO1RA6ND01 250 aa15.37■□□□□ 0.05
CSPG5-202ENST00000383738 LOXL3P58215 753 aa15.37■□□□□ 0.05
CSPG5-202ENST00000383738 RPUSD1Q9UJJ7 312 aaKnown RBP15.37■□□□□ 0.05
CSPG5-202ENST00000383738 A0A1W2PRE2 83 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 PEX7O00628 323 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 IGLL1P15814 213 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 SCGB1D4Q6XE38 83 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 TP73-AS1Q9UF72 201 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 YPEL1O60688 119 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 MMP23AO75900 390 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 CKS2P33552 79 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 TMEM97Q5BJF2 176 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 YPEL2Q96QA6 119 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 GTSF1LQ9H1H1 148 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 SMIM12Q96EX1 92 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 GAFA1Q96PS6 74 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 CST9LQ9H4G1 147 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 IGKV1-16P04430 117 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 IGFL2Q6UWQ7 119 aa15.36■□□□□ 0.05
CSPG5-202ENST00000383738 FOXI3A8MTJ6 420 aaPredicted RBP15.35■□□□□ 0.05
CSPG5-202ENST00000383738 TWIST1Q15672 202 aa15.35■□□□□ 0.05
CSPG5-202ENST00000383738 TMEM136Q6ZRR5 245 aa15.35■□□□□ 0.05
CSPG5-202ENST00000383738 C22orf34Q6ZV56 151 aa15.35■□□□□ 0.05
CSPG5-202ENST00000383738 S100A4P26447 101 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms