RNA–Protein interactions for RNA: ENST00000369547.5

SYT6-201, Transcript of synaptotagmin 6, humanhuman

TSL 1 (best) BASIC

Gene SYT6, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-201ENST00000369547 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 FAM90A9PA6NNJ1 464 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 LOC107984156A0A0G2JMH3 177 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 H3BVH4 76 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 DMRTA1Q5VZB9 504 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 HAPLN4Q86UW8 402 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 ARL17AQ8IVW1 177 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
SYT6-201ENST00000369547 WISP2O76076 250 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 RPS20P60866 119 aaKnown RBP13.18□□□□□ -0.3
SYT6-201ENST00000369547 LYPD6Q86Y78 171 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 FER1L6-AS1Q8NA97 138 aa13.18□□□□□ -0.3
SYT6-201ENST00000369547 E7EQL1 145 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 DKK1O94907 266 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 LMO1P25800 156 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 FXYD7P58549 80 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 OTORQ9NRC9 128 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
SYT6-201ENST00000369547 FAM159AQ6UWV7 190 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
SYT6-201ENST00000369547 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
SYT6-201ENST00000369547 ZNF138P52744 262 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 BRD3OSQ6XYD6 125 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 MED12LQ86YW9 2145 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
SYT6-201ENST00000369547 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
SYT6-201ENST00000369547 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 HIST1H4GQ99525 98 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 MCRIP2Q9BUT9 160 aaKnown RBP13.16□□□□□ -0.3
SYT6-201ENST00000369547 IGKV2-40A0A087WW87 121 aaPredicted RBP13.16□□□□□ -0.3
SYT6-201ENST00000369547 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
SYT6-201ENST00000369547 CNTFRP26992 372 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 RAB9AP51151 201 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 FOXL1Q12952 345 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 ZNF56Q15929 161 aa13.16□□□□□ -0.3
SYT6-201ENST00000369547 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 DDB2Q92466 427 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 HIVEP3Q5T1R4 2406 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 K7EM74 188 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 DNLZQ5SXM8 178 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
SYT6-201ENST00000369547 ORMDL3Q8N138 153 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 Q8TAT8 98 aa13.15□□□□□ -0.3
SYT6-201ENST00000369547 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
SYT6-201ENST00000369547 C15orf32Q32M92 178 aa13.14□□□□□ -0.31
SYT6-201ENST00000369547 NIT1Q86X76 327 aa13.14□□□□□ -0.31
SYT6-201ENST00000369547 A0A1W2PPI3 338 aa13.14□□□□□ -0.31
SYT6-201ENST00000369547 EVI2AP22794 236 aa13.14□□□□□ -0.31
SYT6-201ENST00000369547 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
SYT6-201ENST00000369547 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
SYT6-201ENST00000369547 LINC00614P0C842 121 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 C11orf44Q8N8P7 122 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 GNB1LQ9BYB4 327 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 NUP210Q8TEM1 1887 aaPredicted RBP13.13□□□□□ -0.31
SYT6-201ENST00000369547 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 TRAV9-1A0A075B6T8 112 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 FOXC2Q99958 501 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
SYT6-201ENST00000369547 BUB1B-PAK6H3BSN5 160 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 NCR2O95944 276 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 RNASE4P34096 147 aaKnown RBP13.12□□□□□ -0.31
SYT6-201ENST00000369547 NDPQ00604 133 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 TCRAP04437 139 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 LAMTOR2Q9Y2Q5 125 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 ANKRD11Q6UB99 2663 aaPredicted RBP13.12□□□□□ -0.31
SYT6-201ENST00000369547 RPL13AP40429 203 aaKnown RBP13.12□□□□□ -0.31
SYT6-201ENST00000369547 SPRNQ5BIV9 151 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 DUX5Q96PT3 197 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
SYT6-201ENST00000369547 IGKV3OR2-268A0A0C4DH90 116 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 PFN1P07737 140 aaKnown RBP13.11□□□□□ -0.31
SYT6-201ENST00000369547 SSC4DQ8WTU2 575 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 RNF138Q8WVD3 245 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 NDUFS6O75380 124 aaKnown RBP13.11□□□□□ -0.31
SYT6-201ENST00000369547 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 A6NNC1 897 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 TPSG1Q9NRR2 321 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 CHD8Q9HCK8 2581 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 SRRM4A7MD48 611 aaKnown RBP13.11□□□□□ -0.31
SYT6-201ENST00000369547 NUP35Q8NFH5 326 aa13.11□□□□□ -0.31
SYT6-201ENST00000369547 SORL1Q92673 2214 aa13.1□□□□□ -0.31
SYT6-201ENST00000369547 A0A1W2PNU3 283 aaPredicted RBP13.1□□□□□ -0.31
SYT6-201ENST00000369547 CEACAM4O75871 244 aa13.1□□□□□ -0.31
SYT6-201ENST00000369547 TPTE2P1Q5T6R2 138 aa13.1□□□□□ -0.31
SYT6-201ENST00000369547 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
SYT6-201ENST00000369547 C15orf65H3BRN8 121 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms