RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDGFA-201ENST00000354513 HTR2BP41595 481 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 GSG1LQ6UXU4 331 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 ZNF767PQ75MW2 155 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 MED28Q9H204 178 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 PCLOQ9Y6V0 5065 aa11.42□□□□□ -0.58
PDGFA-201ENST00000354513 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 FAM90A26D6RGX4 464 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 PITX3O75364 302 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 SIX6O95475 246 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 OR10J1P30954 320 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 YPEL3P61236 119 aaPredicted RBP11.41□□□□□ -0.58
PDGFA-201ENST00000354513 C12orf74Q32Q52 190 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 ZBTB8BQ8NAP8 495 aaPredicted RBP11.41□□□□□ -0.58
PDGFA-201ENST00000354513 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 C2orf50Q96LR7 162 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 GSKIPQ9P0R6 139 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 MGAT4CQ9UBM8 478 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 CACFD1Q9UGQ2 172 aa11.41□□□□□ -0.58
PDGFA-201ENST00000354513 RPS10-NUDT3A0A1W2PQS6 291 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 HELTA6NFD8 242 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 CEBPZOSA8MTT3 80 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 AMBPP02760 352 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 Q6ZNX1 250 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 OR4D5Q8NGN0 318 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 RNASEH2CQ8TDP1 164 aaKnown RBP11.4□□□□□ -0.58
PDGFA-201ENST00000354513 HEYLQ9NQ87 328 aaPredicted RBP11.4□□□□□ -0.58
PDGFA-201ENST00000354513 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
PDGFA-201ENST00000354513 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 BUB3O43684 328 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 SCGB1D2O95969 90 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 TOMM40O96008 361 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 IL4P05112 153 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 SLC25A4P12235 298 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 DEFB1P60022 68 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 FCN2Q15485 313 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 Q8WTZ3 238 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 RBKSQ9H477 322 aa11.39□□□□□ -0.59
PDGFA-201ENST00000354513 H3BMM0 161 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 MED6O75586 246 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 NPY1RP25929 384 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
PDGFA-201ENST00000354513 RRAS2P62070 204 aaPredicted RBP11.38□□□□□ -0.59
PDGFA-201ENST00000354513 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 NARS2Q96I59 477 aaKnown RBP11.38□□□□□ -0.59
PDGFA-201ENST00000354513 RNF126Q9BV68 326 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 MAGT1Q9H0U3 335 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 NACAE9PAV3 2078 aa11.38□□□□□ -0.59
PDGFA-201ENST00000354513 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 PSG1P11464 419 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 H2BFSP57053 126 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 ID3Q02535 119 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 OR11H7Q8NGC8 314 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 DTD1Q8TEA8 209 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 ACY3Q96HD9 319 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
PDGFA-201ENST00000354513 NRN1Q9NPD7 142 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
PDGFA-201ENST00000354513 IGKV1D-37A0A075B6S9 117 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 WRBO00258 174 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 SYNGR2O43760 224 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 MBPP02686 304 aaPredicted RBP11.36□□□□□ -0.59
PDGFA-201ENST00000354513 IAPPP10997 89 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 CXCL3P19876 107 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 EIF2B2P49770 351 aaKnown RBP11.36□□□□□ -0.59
PDGFA-201ENST00000354513 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDGFA-201ENST00000354513 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF705AQ6ZN79 300 aaPredicted RBP11.36□□□□□ -0.59
PDGFA-201ENST00000354513 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 NMES1Q9C002 83 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
PDGFA-201ENST00000354513 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 SOCS3O14543 225 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF705DP0CH99 300 aaPredicted RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF705BP0CI00 300 aaPredicted RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 AP2S1P53680 142 aaPredicted RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 S100A10P60903 97 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 IL15RAQ13261 267 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 LSM5Q9Y4Y9 91 aaKnown RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 SSSCA1O60232 199 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 RD3LP0DJH9 198 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 RAB32Q13637 225 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
PDGFA-201ENST00000354513 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
PDGFA-201ENST00000354513 K7EPK0 472 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 RTL8CO15255 209 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF90Q03938 601 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 ETFRF1Q6IPR1 90 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 ZNF709Q8N972 641 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 NEU1Q99519 415 aa11.34□□□□□ -0.59
PDGFA-201ENST00000354513 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms