RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 IGKV1D-33P01593 117 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 IGKV1-33P01594 117 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 NBEAP1P0C6P0 100 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 Q1RN00 199 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 FAM53AQ6NSI3 398 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-201ENST00000334136 Q6ZSR3 168 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 C11orf53Q8IXP5 236 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 FRYLO94915 3013 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 YPEL1O60688 119 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 C18orf15Q96N68 181 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 YPEL2Q96QA6 119 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 PEX7O00628 323 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 MSMBP08118 114 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 TWIST1Q15672 202 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF585BQ52M93 769 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 FBLN7Q53RD9 439 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 FGF23Q9GZV9 251 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-201ENST00000334136 PRRC2AP48634 2157 aaKnown RBP9.6□□□□□ -0.87
HDAC6-201ENST00000334136 CIDEAO60543 219 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 STAG3L2P0CL84 134 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 MORN2Q502X0 79 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 TRAV3A0A0B4J244 114 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 WNT2P09544 360 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 FABP2P12104 132 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 LMO1P25800 156 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 POLQO75417 2590 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 SONP18583 2426 aaKnown RBP9.59□□□□□ -0.87
HDAC6-201ENST00000334136 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 IGHV1-8P0DP01 117 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 DUX4L9Q6RFH8 374 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-201ENST00000334136 OR10AG1Q8NH19 301 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 TRAV5A0A0B4J249 113 aa9.59□□□□□ -0.87
HDAC6-201ENST00000334136 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
HDAC6-201ENST00000334136 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
HDAC6-201ENST00000334136 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 LINC00473A8K010 186 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 SRSF9Q13242 221 aaKnown RBP eCLIP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 MCRIP2Q9BUT9 160 aaKnown RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 IZUMO1RA6ND01 250 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 MYOD1P15172 320 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 OR4C13Q8NGP0 309 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 PEF1Q9UBV8 284 aaKnown RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 S4R3C0 116 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 ARFGEF3Q5TH69 2177 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 TMEM189A5PLL7 270 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 CGB1A6NKQ9 187 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 F5H697 171 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 FCGR2BP31994 310 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-201ENST00000334136 VMO1Q7Z5L0 202 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 TMEM144Q7Z5S9 345 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
HDAC6-201ENST00000334136 TMEM136Q6ZRR5 245 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 DYSFO75923 2080 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 COL27A1Q8IZC6 1860 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV4-30-2A0A087WSY4 118 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 M0R1W7 72 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 KLRD1Q13241 179 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 GRAMD2BQ96HH9 432 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 MGST2Q99735 147 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 C19orf24Q9BVV8 132 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 TRAV9-1A0A075B6T8 112 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF114Q8NC26 417 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-201ENST00000334136 OR10W1Q8NGF6 305 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 OSTCQ9NRP0 149 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 THYN1Q9P016 225 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 KAAG1Q9UBP8 84 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 CDC42EP3Q9UKI2 254 aa9.57□□□□□ -0.88
HDAC6-201ENST00000334136 M0QZ24 198 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 IGKV1-39P01597 117 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 IGKV1D-39P04432 117 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 GPX1P07203 203 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 LYPD6Q86Y78 171 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 RNASEH2CQ8TDP1 164 aaKnown RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 TNCP24821 2201 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV2-26A0A0B4J1V2 119 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 C7orf71A4D174 169 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 LOXP28300 417 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 LGALS7P47929 136 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 KLK15Q9H2R5 256 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-201ENST00000334136 IGHV4-61A0A0C4DH41 118 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 C15orf62A8K5M9 175 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 H3BUT2 72 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 PRTN3P24158 256 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 PRSS8Q16651 343 aa9.56□□□□□ -0.88
HDAC6-201ENST00000334136 MPV17L2Q567V2 206 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms