RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 A0A1B0GXF2 115 aa19.92■□□□□ 0.78
ROM1-201ENST00000278833 ZNF705FA8MVS1 300 aaPredicted RBP19.92■□□□□ 0.78
ROM1-201ENST00000278833 ZNF705DP0CH99 300 aaPredicted RBP19.92■□□□□ 0.78
ROM1-201ENST00000278833 ZNF705BP0CI00 300 aaPredicted RBP19.92■□□□□ 0.78
ROM1-201ENST00000278833 SRIP30626 198 aa19.92■□□□□ 0.78
ROM1-201ENST00000278833 KLF5Q13887 457 aaPredicted RBP19.92■□□□□ 0.78
ROM1-201ENST00000278833 LINC01560Q8TB33 94 aa19.92■□□□□ 0.78
ROM1-201ENST00000278833 FBXL15Q9H469 300 aa19.92■□□□□ 0.78
ROM1-201ENST00000278833 OTORQ9NRC9 128 aa19.92■□□□□ 0.78
ROM1-201ENST00000278833 GNG5P63218 68 aa19.91■□□□□ 0.78
ROM1-201ENST00000278833 TOMM20LQ6UXN7 152 aa19.91■□□□□ 0.78
ROM1-201ENST00000278833 LYNX1G3V0Z9 82 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 SPINK4O60575 86 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 LYNX1P0DP58 116 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 HOXB4P17483 251 aaPredicted RBP19.9■□□□□ 0.78
ROM1-201ENST00000278833 A0A1W2PS18 150 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 C19orf71A6NCJ1 209 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 ZNF253O75346 499 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 ZNF324O75467 553 aaPredicted RBP19.9■□□□□ 0.78
ROM1-201ENST00000278833 CA1P00915 261 aaPredicted RBP19.9■□□□□ 0.78
ROM1-201ENST00000278833 TCRAP04437 139 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 COX7A1P24310 79 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 SLC35B1P78383 322 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 Q9H3A6 140 aa19.9■□□□□ 0.78
ROM1-201ENST00000278833 A0A1B0GV90 55 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 M0R1W7 72 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 NDUFA3O95167 84 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 NPBQ8NG41 125 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 SSBP3Q9BWW4 388 aaPredicted RBP19.89■□□□□ 0.77
ROM1-201ENST00000278833 GFRA4Q9GZZ7 299 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 FBXL7Q9UJT9 491 aa19.89■□□□□ 0.77
ROM1-201ENST00000278833 SNRPCP09234 159 aaKnown RBP19.88■□□□□ 0.77
ROM1-201ENST00000278833 SLAQ13239 276 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 C19orf35Q6ZS72 473 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 Q8N976 141 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 BLNKQ8WV28 456 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 TMEM68Q96MH6 324 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 NEU1Q99519 415 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 RPP21Q9H633 154 aaKnown RBP19.88■□□□□ 0.77
ROM1-201ENST00000278833 TBL2Q9Y4P3 447 aaKnown RBP19.88■□□□□ 0.77
ROM1-201ENST00000278833 FAM231BA6NCW3 169 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 FAM90A27PA6NNH2 459 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 PSG1P11464 419 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 SRSF1Q07955 248 aaKnown RBP eCLIP19.88■□□□□ 0.77
ROM1-201ENST00000278833 C18orf32Q8TCD1 76 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 CFHR4Q92496 578 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 RCHY1Q96PM5 261 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 RAB1BQ9H0U4 201 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 RNF24Q9Y225 148 aa19.88■□□□□ 0.77
ROM1-201ENST00000278833 LRRK2Q5S007 2527 aa19.87■□□□□ 0.77
ROM1-201ENST00000278833 NPIPB6E9PJ23 425 aa19.87■□□□□ 0.77
ROM1-201ENST00000278833 CDKN1AP38936 164 aa19.87■□□□□ 0.77
ROM1-201ENST00000278833 DLX1P56177 255 aa19.87■□□□□ 0.77
ROM1-201ENST00000278833 KIAA1644Q3SXP7 199 aa19.87■□□□□ 0.77
ROM1-201ENST00000278833 SLC25A39Q9BZJ4 359 aaPredicted RBP19.87■□□□□ 0.77
ROM1-201ENST00000278833 ODF3BA8MYP8 253 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 HTR1DP28221 377 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 MMDQ15546 238 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 NRN1Q9NPD7 142 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 DPM3Q9P2X0 92 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 SPTBN1Q01082 2364 aaKnown RBP19.86■□□□□ 0.77
ROM1-201ENST00000278833 HIGD1CA8MV81 97 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 K7EIM0 57 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 TIMM23O14925 209 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 IGKV1-17P01599 117 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 RAB4AP20338 218 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 CEACAM3P40198 252 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 AMTP48728 403 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 ADORA2A-AS1P86434 159 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 GDF5OSQ5U4N7 250 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 OR4B1Q8NGF8 309 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 ZNF48Q96MX3 618 aaPredicted RBP19.86■□□□□ 0.77
ROM1-201ENST00000278833 RASL11BQ9BPW5 248 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 PKDREJQ9NTG1 2253 aa19.86■□□□□ 0.77
ROM1-201ENST00000278833 A8MWL6 223 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 NBR2O15453 112 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 LDLRAD2Q5SZI1 272 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 C11orf71Q6IPW1 123 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 TIMD4Q96H15 378 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 WNT10AQ9GZT5 417 aa19.85■□□□□ 0.77
ROM1-201ENST00000278833 EREGO14944 169 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 C16orf54Q6UWD8 224 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 Q86TA4 180 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 VAMP8Q9BV40 100 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 ONECUT1Q9UBC0 465 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 PLXNB1O43157 2135 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 H3BRN7 92 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 LYZP61626 148 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 NIT1Q86X76 327 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 NEU4Q8WWR8 484 aaPredicted RBP19.84■□□□□ 0.77
ROM1-201ENST00000278833 MIEN1Q9BRT3 115 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 SHANK2-AS3Q9BTD1 123 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 CBLN4Q9NTU7 201 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 RNF114Q9Y508 228 aa19.84■□□□□ 0.77
ROM1-201ENST00000278833 ROS1P08922 2347 aa19.83■□□□□ 0.77
ROM1-201ENST00000278833 M0R143 59 aa19.83■□□□□ 0.76
ROM1-201ENST00000278833 GRNP28799 593 aaKnown RBP19.83■□□□□ 0.76
ROM1-201ENST00000278833 PRR27Q6MZM9 219 aa19.83■□□□□ 0.76
ROM1-201ENST00000278833 LYPD1Q8N2G4 141 aa19.83■□□□□ 0.76
ROM1-201ENST00000278833 SNHG12Q9BXW3 62 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms