RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 IGF2BP2-AS1Q96M15 143 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 BIN3Q9NQY0 253 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 K7EN84 100 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 PEX7O00628 323 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 RHOGP84095 191 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 BTF3L4Q96K17 158 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 EPDR1Q9UM22 224 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 ABCA1O95477 2261 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 G3V318 75 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 H3BUX3 64 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 GCGP01275 180 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 FOXL1Q12952 345 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 C15orf32Q32M92 178 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 KCNIP4Q6PIL6 250 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 BPIFA4PQ86YQ2 179 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 S4R3C0 116 aa11.17□□□□□ -0.62
RTFDC1-201ENST00000023939 SH2D7A6NKC9 451 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 IGHG2P01859 326 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 TYMSP04818 313 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 S100A9P06702 114 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 ADMP35318 185 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 ZFP82Q8N141 532 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
RTFDC1-201ENST00000023939 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 PGPA6NDG6 321 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 FSHBP01225 129 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 PLA2G2AP14555 144 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 S100A7P31151 101 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 Q5PR19 223 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 LYPD1Q8N2G4 141 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 BLNKQ8WV28 456 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
RTFDC1-201ENST00000023939 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 ZNF98A6NK75 572 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 FAM223BA6NKX1 122 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 RNF223E7ERA6 249 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 H3BUA1 57 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 TGFAP01135 160 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 EEF1AKMT3Q96AZ1 226 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 ATG101Q9BSB4 218 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 Q9H3A6 140 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 OSTCQ9NRP0 149 aa11.15□□□□□ -0.63
RTFDC1-201ENST00000023939 TACC2O95359 2948 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■■■ 31.6
RTFDC1-201ENST00000023939 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 J3QKU1 62 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 ISLRO14498 428 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 SLC25A5P05141 298 aaKnown RBP11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
RTFDC1-201ENST00000023939 C5orf52A6NGY3 159 aa11.13□□□□□ -0.63
RTFDC1-201ENST00000023939 PHOX2AO14813 284 aa11.13□□□□□ -0.63
RTFDC1-201ENST00000023939 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
RTFDC1-201ENST00000023939 PDE6HQ13956 83 aa11.13□□□□□ -0.63
RTFDC1-201ENST00000023939 PPP5D1E7EU14 171 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 BMPR1BO00238 502 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 TCRAP04437 139 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 CLEC3BP05452 202 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 HNF1AP20823 631 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 GPR183P32249 361 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 LY6EQ16553 131 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 V9GYV3 84 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 TRBV6-1A0A0K0K1D8 114 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 S100A6P06703 90 aa11.12□□□□□ -0.63
RTFDC1-201ENST00000023939 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms