RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 BAK1Q16611 211 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 TMEM128Q5BJH2 165 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 Q8NAQ8 132 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 SRRQ9GZT4 340 aa11.9□□□□□ -0.5
COLCA2-207ENST00000639470 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 BUB3O43684 328 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 DEDDO75618 318 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 ADAP1O75689 374 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 SFT2D2O95562 160 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 ANXA3P12429 323 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
COLCA2-207ENST00000639470 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
COLCA2-207ENST00000639470 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
COLCA2-207ENST00000639470 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
COLCA2-207ENST00000639470 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
COLCA2-207ENST00000639470 U3KQ87 197 aa11.89□□□□□ -0.51
COLCA2-207ENST00000639470 HELTA6NFD8 242 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 ZFP92A6NM28 416 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 H3BP45 60 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 WRBO00258 174 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 S100A5P33763 92 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 AP3S2P59780 193 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 LYZP61626 148 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 SRPXP78539 464 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
COLCA2-207ENST00000639470 X6R8D5 127 aa11.88□□□□□ -0.51
COLCA2-207ENST00000639470 ATF4P18848 351 aaPredicted RBP11.87□□□□□ -0.51
COLCA2-207ENST00000639470 FXYD7P58549 80 aa11.87□□□□□ -0.51
COLCA2-207ENST00000639470 SIGLEC15Q6ZMC9 328 aa11.87□□□□□ -0.51
COLCA2-207ENST00000639470 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
COLCA2-207ENST00000639470 LRTM2Q8N967 370 aa11.87□□□□□ -0.51
COLCA2-207ENST00000639470 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
COLCA2-207ENST00000639470 ELOA3CA0A087WX78 387 aaPredicted RBP11.86□□□□□ -0.51
COLCA2-207ENST00000639470 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 IGKV3-20P01619 116 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 GATA2P23769 480 aaPredicted RBP11.86□□□□□ -0.51
COLCA2-207ENST00000639470 BTCP35070 178 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 EIF2B2P49770 351 aaKnown RBP11.86□□□□□ -0.51
COLCA2-207ENST00000639470 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 CENPSQ8N2Z9 138 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 TMEM217Q8N7C4 229 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 CELA1Q9UNI1 258 aa11.86□□□□□ -0.51
COLCA2-207ENST00000639470 CCNKO75909 580 aa11.85□□□□□ -0.51
COLCA2-207ENST00000639470 SLC25A21Q9BQT8 299 aaPredicted RBP11.85□□□□□ -0.51
COLCA2-207ENST00000639470 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
COLCA2-207ENST00000639470 DUXBA0A1W2PPF3 345 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 C9orf170A2RU37 121 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 F6UB75 175 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 H3BMM0 161 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRR20EP86478 221 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRR20CP86479 221 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRR20DP86480 221 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRR20BP86481 221 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 PRR20AP86496 221 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 SCRT1Q9BWW7 348 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 KLK5Q9Y337 293 aaPredicted RBP11.84□□□□□ -0.51
COLCA2-207ENST00000639470 BIRC6Q9NR09 4857 aa11.84□□□□□ -0.51
COLCA2-207ENST00000639470 ZNF705EA8MWA4 302 aaPredicted RBP11.83□□□□□ -0.52
COLCA2-207ENST00000639470 SOCS3O14543 225 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 SYNGR2O43760 224 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 SPP1P10451 314 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 SPANXN2Q5MJ10 180 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 C20orf173Q96LM9 149 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 LINC00052Q96N35 136 aa11.83□□□□□ -0.52
COLCA2-207ENST00000639470 NDUFB6O95139 128 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 SLC25A6P12236 298 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 MORN3Q6PF18 240 aaPredicted RBP11.82□□□□□ -0.52
COLCA2-207ENST00000639470 Q6ZTC4 211 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 ACOT7LQ6ZUV0 252 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 TRGV9Q99603 122 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 CACFD1Q9UGQ2 172 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 TMED3Q9Y3Q3 217 aa11.82□□□□□ -0.52
COLCA2-207ENST00000639470 AP2S1P53680 142 aaPredicted RBP11.81□□□□□ -0.52
COLCA2-207ENST00000639470 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
COLCA2-207ENST00000639470 RAB11AP62491 216 aa11.81□□□□□ -0.52
COLCA2-207ENST00000639470 TRIQKQ629K1 86 aa11.81□□□□□ -0.52
COLCA2-207ENST00000639470 IGFL4Q6B9Z1 124 aa11.81□□□□□ -0.52
COLCA2-207ENST00000639470 OR8G2PQ6IF36 304 aa11.81□□□□□ -0.52
COLCA2-207ENST00000639470 PPP1R14BQ96C90 147 aa11.81□□□□□ -0.52
COLCA2-207ENST00000639470 SLC25A32Q9H2D1 315 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms