RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 C17orf58Q2M2W7 97 aa5.6□□□□□ -1.51
SYNPO2-206ENST00000610556 UTF1Q5T230 341 aa5.6□□□□□ -1.51
SYNPO2-206ENST00000610556 TMEM70Q9BUB7 260 aa5.6□□□□□ -1.51
SYNPO2-206ENST00000610556 LPAR2Q9HBW0 351 aa5.6□□□□□ -1.51
SYNPO2-206ENST00000610556 TMEM14BQ9NUH8 114 aa5.6□□□□□ -1.51
SYNPO2-206ENST00000610556 TCRBV4S1A1TA0A5B7 111 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 PRSS1P07477 247 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 WT1P19544 449 aaPredicted RBP5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 PPOXP50336 477 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 ATP5IP56385 69 aaPredicted RBP5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 LOXL3P58215 753 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 C2orf83Q53S99 150 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 Q8TCH9 128 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 ABHD17AQ96GS6 310 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 DIRC2Q96SL1 478 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF257Q9Y2Q1 563 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 SELENOKQ9Y6D0 94 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 TLN1Q9Y490 2541 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 PROP1O75360 226 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 NUDT3O95989 172 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF138P52744 262 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 LYPD2Q6UXB3 125 aa5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 RPP21Q9H633 154 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-206ENST00000610556 H0YJW9 148 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 CORTO00230 105 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 WNT2P09544 360 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 CEACAM3P40198 252 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 RPL15P61313 204 aaKnown RBP5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 DIAPH2-AS1Q14236 149 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 ECSCRQ19T08 205 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 ZNF788Q6ZQV5 615 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 SLC25A48Q6ZT89 311 aaKnown RBP5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 EXOC3-AS1Q8N2X6 119 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 NUP35Q8NFH5 326 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 CLEC7AQ9BXN2 247 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 UFC1Q9Y3C8 167 aa5.59□□□□□ -1.52
SYNPO2-206ENST00000610556 SH2D7A6NKC9 451 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 NMUP48645 174 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 TDGF1P3P51864 188 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 MEF2CQ06413 473 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 DNLZQ5SXM8 178 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 SLC25A34Q6PIV7 304 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 NIT1Q86X76 327 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 WFDC3Q8IUB2 231 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 TMEM208Q9BTX3 173 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 THYN1Q9P016 225 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 V9GYV3 84 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 DOPEY2Q9Y3R5 2298 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 A0A1W2PS18 150 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 MSMPQ1L6U9 139 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 CIARTQ8N365 385 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 RCHY1Q96PM5 261 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 AP5S1Q9NUS5 200 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 TMEM189A5PLL7 270 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 C19orf67A6NJJ6 358 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 YPEL3P61236 119 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 TWIST1Q15672 202 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 VWC2Q2TAL6 325 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 KLF17Q5JT82 389 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 FAM57AQ8TBR7 257 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 FAM168AQ92567 244 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 NEUROG1Q92886 237 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 SPRY4Q9C004 299 aa5.58□□□□□ -1.52
SYNPO2-206ENST00000610556 CEP295Q9C0D2 2601 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 A0A1B0GWJ7 208 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 CCL21O00585 134 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 SSBP2P81877 361 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 SLAQ13239 276 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 TMEM30BQ3MIR4 351 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 OR10J3Q5JRS4 329 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 TSKUQ8WUA8 353 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 RAB1BQ9H0U4 201 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 TPSG1Q9NRR2 321 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MBD3L4A6NDZ8 208 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MBD3L3A6NE82 208 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MBD3L5A6NJ08 208 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 DLEU1O43261 78 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 IGLV1-44P01699 117 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 APOHP02749 345 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 S100A4P26447 101 aaKnown RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 CKS2P33552 79 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 PCP4P48539 62 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MORN5Q5VZ52 161 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 PPP1R27Q86WC6 154 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 OR4A5Q8NH83 315 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 RNASE6Q93091 150 aaKnown RBP5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 RAB37Q96AX2 223 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 CPAMD8Q8IZJ3 1885 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 MUC6Q6W4X9 2439 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 IGHV3-66A0A0C4DH42 116 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 LY6HO94772 140 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 PSG1P11464 419 aa5.57□□□□□ -1.52
SYNPO2-206ENST00000610556 TDGF1P13385 188 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 268 ms