RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 WRBO00258 174 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 ZNF688P0C7X2 276 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 RD3LP0DJH9 198 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 EWSR1Q01844 656 aaKnown RBP eCLIP9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 SLC35E1Q96K37 410 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 RARRES2Q99969 163 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 CCDC32Q9BV29 185 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 C20orf85Q9H1P6 137 aa9.34□□□□□ -0.91
NPLOC4-213ENST00000573519 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 HELTA6NFD8 242 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 ZFP92A6NM28 416 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 FAM90A26D6RGX4 464 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 K7EQG2 157 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 SYNGR2O43760 224 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 MED6O75586 246 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 TOMM40O96008 361 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 TCRBP04435 133 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 PSG1P11464 419 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 TMEM217Q8N7C4 229 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 OR51G1Q8NGK1 321 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 PBDC1Q9BVG4 233 aa9.33□□□□□ -0.92
NPLOC4-213ENST00000573519 KNCNA6PVL3 124 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 H3BP45 60 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 IFNA21P01568 189 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 GPX4P36969 197 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 AP2S1P53680 142 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 ATP5IP56385 69 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 RAB11AP62491 216 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 GAMTQ14353 236 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 SPANXN5Q5MJ07 72 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 C16orf54Q6UWD8 224 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 OR11H2Q8NH07 326 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 GATAD1Q8WUU5 269 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 GLMPQ8WWB7 406 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 S100ZQ8WXG8 99 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 NUDT15Q9NV35 164 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 TBC1D24Q9ULP9 559 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 U3KQE9 123 aa9.32□□□□□ -0.92
NPLOC4-213ENST00000573519 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 SCGB1D2O95969 90 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 ID3Q02535 119 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 ZNF90Q03938 601 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 PSMG4Q5JS54 123 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 SIGLEC15Q6ZMC9 328 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 LINC00299Q6ZSB3 139 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 OR4D5Q8NGN0 318 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 RNF125Q96EQ8 232 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 CIB3Q96Q77 187 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 PTTG2Q9NZH5 202 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 GSKIPQ9P0R6 139 aa9.31□□□□□ -0.92
NPLOC4-213ENST00000573519 IGKV1D-37A0A075B6S9 117 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 CCSO14618 274 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 SSSCA1O60232 199 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 FABP1P07148 127 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 LYZP61626 148 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 OR2F1Q13607 317 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 IAH1Q2TAA2 248 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
NPLOC4-213ENST00000573519 DEFB4AO15263 64 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 BUB3O43684 328 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 H2AFB2P0C5Z0 115 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 SNRPD3P62318 126 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 IFITM3Q01628 133 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 ZNF846Q147U1 533 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 ZNF431Q8TF32 576 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 PPP1R14BQ96C90 147 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 WDR12Q9GZL7 423 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 NRN1Q9NPD7 142 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 PSENENQ9NZ42 101 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 STRAPQ9Y3F4 350 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-213ENST00000573519 SNRPGP15A8MWD9 76 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 PRSS46E5RG02 174 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 UPK1BO75841 260 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 LY6G6CO95867 125 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 SPP1P10451 314 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 ATF4P18848 351 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 NUP62P37198 522 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 ASAH1Q13510 395 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 MZT2BQ6NZ67 158 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 RAB40CQ96S21 281 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-213ENST00000573519 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms