RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 DEDDO75618 318 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 IFNA4P05014 189 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 FAUP35544 74 aaKnown RBP12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 AP2S1P53680 142 aaPredicted RBP12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 TMED4Q7Z7H5 227 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 OR1S1Q8NH92 325 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 CLEC5AQ9NY25 188 aa12.65□□□□□ -0.38
MAP1LC3B-207ENST00000565788 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SIGLEC15Q6ZMC9 328 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 NRN1Q9NPD7 142 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 V9GYH0 126 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 X6R8D5 127 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
MAP1LC3B-207ENST00000565788 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PITX3O75364 302 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 IAPPP10997 89 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 MIFP14174 115 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 GAMTQ14353 236 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 ZNF79Q15937 498 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PBDC1Q9BVG4 233 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 DNAH10Q8IVF4 4471 aa12.63□□□□□ -0.39
MAP1LC3B-207ENST00000565788 ZFP92A6NM28 416 aa12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 GPX4P36969 197 aaPredicted RBP12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 AP3S2P59780 193 aa12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 ZNF90Q03938 601 aa12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 TMEM128Q5BJH2 165 aa12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 HRH4Q9H3N8 390 aa12.62□□□□□ -0.39
MAP1LC3B-207ENST00000565788 ELOA3CA0A087WX78 387 aaPredicted RBP12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 VAMP1P23763 118 aa12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 ATP5IP56385 69 aaPredicted RBP12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 OR8G2PQ6IF36 304 aa12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SEPSECSQ9HD40 501 aaKnown RBP12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 DNAH6Q9C0G6 4158 aa12.61□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
MAP1LC3B-207ENST00000565788 H3BMM0 161 aa12.6□□□□□ -0.39
MAP1LC3B-207ENST00000565788 LYZP61626 148 aa12.6□□□□□ -0.39
MAP1LC3B-207ENST00000565788 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 IGLL5B9A064 214 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SFT2D2O95562 160 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SLC25A6P12236 298 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 NUP62P37198 522 aaPredicted RBP12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 DEFB1P60022 68 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PPP1R1AQ13522 171 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 OR2F1Q13607 317 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 Q6ZTC4 211 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 SLC25A21Q9BQT8 299 aaPredicted RBP12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 XCL2Q9UBD3 114 aa12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 PAIP2BQ9ULR5 123 aaKnown RBP12.59□□□□□ -0.39
MAP1LC3B-207ENST00000565788 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 S100A5P33763 92 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 NKX2-1P43699 371 aaPredicted RBP12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 TCTAP57738 103 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 NUTF2P61970 127 aaKnown RBP12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 RAB11AP62491 216 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRR20EP86478 221 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRR20CP86479 221 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRR20DP86480 221 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRR20BP86481 221 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRR20AP86496 221 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 GSG1LQ6UXU4 331 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 CCDC190Q86UF4 302 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 TRGV9Q99603 122 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 WDR12Q9GZL7 423 aaKnown RBP12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 APLNQ9ULZ1 77 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 CELA1Q9UNI1 258 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
MAP1LC3B-207ENST00000565788 IGKV1OR2-108A0A075B7D4 117 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 HOXB5P09067 269 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 GDF5OSQ5U4N7 250 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PFDN2Q9UHV9 154 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
MAP1LC3B-207ENST00000565788 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 PRSS46E5RG02 174 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 SOCS3O14543 225 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 MED6O75586 246 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 FABP1P07148 127 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 CENPSQ8N2Z9 138 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 RBM38Q9H0Z9 239 aaKnown RBP12.56□□□□□ -0.4
MAP1LC3B-207ENST00000565788 TRAV10A0A0B4J240 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms