RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLIRPQ9GZT3 109 aaKnown RBP16.39■□□□□ 0.21
ACTN1-220ENST00000556433 IGLL5B9A064 214 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 C11orf94C9JXX5 98 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 FAM90A26D6RGX4 464 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 ANXA3P12429 323 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 TCTAP57738 103 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 SNRPD3P62318 126 aaKnown RBP16.38■□□□□ 0.21
ACTN1-220ENST00000556433 SIGLEC15Q6ZMC9 328 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 NRN1Q9NPD7 142 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 TBC1D24Q9ULP9 559 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 X6R8D5 127 aa16.38■□□□□ 0.21
ACTN1-220ENST00000556433 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
ACTN1-220ENST00000556433 HLA-DMBP28068 263 aa16.37■□□□□ 0.21
ACTN1-220ENST00000556433 SRPXP78539 464 aa16.37■□□□□ 0.21
ACTN1-220ENST00000556433 CSNK1G2-AS1Q8NCQ2 148 aa16.37■□□□□ 0.21
ACTN1-220ENST00000556433 OR1S1Q8NH92 325 aa16.37■□□□□ 0.21
ACTN1-220ENST00000556433 MCFD2Q8NI22 146 aa16.37■□□□□ 0.21
ACTN1-220ENST00000556433 SEPSECSQ9HD40 501 aaKnown RBP16.37■□□□□ 0.21
ACTN1-220ENST00000556433 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-220ENST00000556433 CENPSQ8N2Z9 138 aa16.36■□□□□ 0.21
ACTN1-220ENST00000556433 RNF125Q96EQ8 232 aa16.36■□□□□ 0.21
ACTN1-220ENST00000556433 PBDC1Q9BVG4 233 aa16.36■□□□□ 0.21
ACTN1-220ENST00000556433 ELOA3CA0A087WX78 387 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-220ENST00000556433 ZFP92A6NM28 416 aa16.35■□□□□ 0.21
ACTN1-220ENST00000556433 H3BMQ9 156 aa16.35■□□□□ 0.21
ACTN1-220ENST00000556433 GPX4P36969 197 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-220ENST00000556433 NUTF2P61970 127 aaKnown RBP16.35■□□□□ 0.21
ACTN1-220ENST00000556433 PFDN2Q9UHV9 154 aa16.35■□□□□ 0.21
ACTN1-220ENST00000556433 APLNQ9ULZ1 77 aa16.35■□□□□ 0.21
ACTN1-220ENST00000556433 FAUP35544 74 aaKnown RBP16.34■□□□□ 0.21
ACTN1-220ENST00000556433 PRR20EP86478 221 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 PRR20CP86479 221 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 PRR20DP86480 221 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 PRR20BP86481 221 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 PRR20AP86496 221 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 GAMTQ14353 236 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 SLC35E1Q96K37 410 aa16.34■□□□□ 0.21
ACTN1-220ENST00000556433 H3BMM0 161 aa16.33■□□□□ 0.2
ACTN1-220ENST00000556433 NUP62P37198 522 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-220ENST00000556433 ZNF90Q03938 601 aa16.33■□□□□ 0.2
ACTN1-220ENST00000556433 Q6ZTC4 211 aa16.33■□□□□ 0.2
ACTN1-220ENST00000556433 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.2
ACTN1-220ENST00000556433 XCL2Q9UBD3 114 aa16.33■□□□□ 0.2
ACTN1-220ENST00000556433 IGKV1D-37A0A075B6S9 117 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 PIGBOS1A0A0B4J2F0 54 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 PYDC2Q56P42 97 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 OR8G2PQ6IF36 304 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 DNAH10Q8IVF4 4471 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 FRAS1Q86XX4 4008 aa16.32■□□□□ 0.2
ACTN1-220ENST00000556433 TRAV10A0A0B4J240 114 aa16.31■□□□□ 0.2
ACTN1-220ENST00000556433 PITX3O75364 302 aa16.31■□□□□ 0.2
ACTN1-220ENST00000556433 NKX2-1P43699 371 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-220ENST00000556433 TMEM128Q5BJH2 165 aa16.31■□□□□ 0.2
ACTN1-220ENST00000556433 TOMM5Q8N4H5 51 aa16.31■□□□□ 0.2
ACTN1-220ENST00000556433 VPS13DQ5THJ4 4388 aa16.31■□□□□ 0.2
ACTN1-220ENST00000556433 DUXBA0A1W2PPF3 345 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 SNRPGP15A8MWD9 76 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 FABP1P07148 127 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 IAPPP10997 89 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 AP3S2P59780 193 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 LYZP61626 148 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 RAB11AP62491 216 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 LINC00052Q96N35 136 aa16.3■□□□□ 0.2
ACTN1-220ENST00000556433 PAIP2BQ9ULR5 123 aaKnown RBP16.3■□□□□ 0.2
ACTN1-220ENST00000556433 HLA-DRB4P13762 266 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 VAMP1P23763 118 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 OR2F1Q13607 317 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 TRIM63Q969Q1 353 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 WDR12Q9GZL7 423 aaKnown RBP16.29■□□□□ 0.2
ACTN1-220ENST00000556433 CELA1Q9UNI1 258 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 HLA-DRB4X5D2U9 266 aa16.29■□□□□ 0.2
ACTN1-220ENST00000556433 IGKV3-20P01619 116 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 ID1P41134 155 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 DEFB1P60022 68 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 C1orf194Q5T5A4 169 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 ZNF767PQ75MW2 155 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 LRTM2Q8N967 370 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 PPP1R14BQ96C90 147 aa16.28■□□□□ 0.2
ACTN1-220ENST00000556433 IGHV4-4A0A075B6R2 117 aa16.27■□□□□ 0.2
ACTN1-220ENST00000556433 C12orf74Q32Q52 190 aa16.27■□□□□ 0.2
ACTN1-220ENST00000556433 GDF5OSQ5U4N7 250 aa16.27■□□□□ 0.2
ACTN1-220ENST00000556433 TRGV9Q99603 122 aa16.27■□□□□ 0.2
ACTN1-220ENST00000556433 SLC25A21Q9BQT8 299 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-220ENST00000556433 KRTAP17-1Q9BYP8 105 aa16.27■□□□□ 0.2
ACTN1-220ENST00000556433 MED6O75586 246 aa16.26■□□□□ 0.19
ACTN1-220ENST00000556433 SLC25A6P12236 298 aa16.26■□□□□ 0.19
ACTN1-220ENST00000556433 SAV1Q9H4B6 383 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-220ENST00000556433 DEFB131BA0A096LNP1 70 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 SFT2D2O95562 160 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 FXYD7P58549 80 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 GSG1LQ6UXU4 331 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 FOXI2Q6ZQN5 318 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 OR8I2Q8N0Y5 310 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 COQ8AQ8NI60 647 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 RNF126Q9BV68 326 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 MAGT1Q9H0U3 335 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 TMED3Q9Y3Q3 217 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 V9GYH0 126 aa16.25■□□□□ 0.19
ACTN1-220ENST00000556433 IGKV1OR2-108A0A075B7D4 117 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms