RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SLAMF6Q96DU3 332 aa1.73□□□□□ -2.13
PCNX4-206ENST00000553513 MRPL40Q9NQ50 206 aaKnown RBP1.73□□□□□ -2.13
PCNX4-206ENST00000553513 LHFPL6Q9Y693 200 aa1.73□□□□□ -2.13
PCNX4-206ENST00000553513 PLXNA3P51805 1871 aa1.73□□□□□ -2.13
PCNX4-206ENST00000553513 UHRF1BP1Q6BDS2 1440 aa1.73□□□□□ -2.13
PCNX4-206ENST00000553513 MDC1Q14676 2089 aaKnown RBP1.73□□□□□ -2.13
PCNX4-206ENST00000553513 UBL3O95164 117 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 IFNA21P01568 189 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 BRS3P32247 399 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 PSMD8P48556 350 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 C22orf39Q6P5X5 142 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 DCUN1D2Q6PH85 259 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 FP248Q71RG6 208 aaPredicted RBP1.72□□□□□ -2.13
PCNX4-206ENST00000553513 PDZD9Q8IXQ8 264 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 OR10J5Q8NHC4 309 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 STAG3L4Q8TBR4 150 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 ZNF714Q96N38 554 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 SLC25A21Q9BQT8 299 aaPredicted RBP1.72□□□□□ -2.13
PCNX4-206ENST00000553513 BCL2L10Q9HD36 194 aa1.72□□□□□ -2.13
PCNX4-206ENST00000553513 YTHDC2Q9H6S0 1430 aaKnown RBP1.72□□□□□ -2.13
PCNX4-206ENST00000553513 MED1Q15648 1581 aaPredicted RBP1.72□□□□□ -2.13
PCNX4-206ENST00000553513 ADGRB3O60242 1522 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 DOCK10Q96BY6 2186 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 TRAV1-1A0A0B4J248 108 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 MAP1LC3B2A6NCE7 125 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 MFSD11O43934 449 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 PIAS1O75925 651 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 CLPSP04118 112 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 CTSDP07339 412 aaPredicted RBP1.71□□□□□ -2.14
PCNX4-206ENST00000553513 Q1T7F1 81 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 ESRGQ1W209 222 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 RNASE10Q5GAN6 216 aaKnown RBP1.71□□□□□ -2.14
PCNX4-206ENST00000553513 LINC00301Q8NCQ3 95 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 ADAT3Q96EY9 351 aaPredicted RBP1.71□□□□□ -2.14
PCNX4-206ENST00000553513 LINC00467Q9BRT7 94 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 NPCDR1Q9BY65 106 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 MAP1LC3BQ9GZQ8 125 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 TMEM133Q9H2Q1 129 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 RTTNQ86VV8 2226 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 DISP1Q96F81 1524 aa1.71□□□□□ -2.14
PCNX4-206ENST00000553513 TRAV3A0A0B4J244 114 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 IGKV1-9A0A0C4DH69 117 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 J3QKU1 62 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 GPR31O00270 319 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 SYNMO15061 1565 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 TIMM17BO60830 172 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 ZNF705BP0CI00 300 aaPredicted RBP1.7□□□□□ -2.14
PCNX4-206ENST00000553513 GLRXP35754 106 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 B2MP61769 119 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 DYNLT1P63172 113 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 ZNF846Q147U1 533 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 LINC00311Q8N616 119 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 C12orf29Q8N999 325 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 Q96M85 177 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
PCNX4-206ENST00000553513 ADAT1Q9BUB4 502 aaKnown RBP1.7□□□□□ -2.14
PCNX4-206ENST00000553513 CCDC32Q9BV29 185 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 MRPL32Q9BYC8 188 aaKnown RBP1.7□□□□□ -2.14
PCNX4-206ENST00000553513 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 LY96Q9Y6Y9 160 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 CUL9Q8IWT3 2517 aa1.7□□□□□ -2.14
PCNX4-206ENST00000553513 SETD5Q9C0A6 1442 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 A8MWV9 139 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 E7EQ34 232 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 H0YJX3 145 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 H3BQV1 296 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 TMEM256-PLSCR3K7ERE1 68 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 OR2T1O43869 369 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 GADD45GO95257 159 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 IFNA4P05014 189 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 HLA-EP13747 358 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 S100GP29377 79 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 DYNLT3P51808 116 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 RHOGP84095 191 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 TFAMQ00059 246 aaKnown RBP1.69□□□□□ -2.14
PCNX4-206ENST00000553513 NUP35Q8NFH5 326 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 OR2T35Q8NGX2 323 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 OR4K15Q8NH41 348 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 SFT2D1Q8WV19 159 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 PLEKHB2Q96CS7 222 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 TEX37Q96LM6 180 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 POPDC3Q9HBV1 291 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 HS3ST2Q9Y278 367 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 STRCP1A6NGW2 1772 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 GBF1Q92538 1859 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
PCNX4-206ENST00000553513 PCDH15Q96QU1 1955 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 TRIOBPQ9H2D6 2365 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 TSTD3H0UI37 97 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 TRGC2P03986 189 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 MIFP14174 115 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 SSR2P43308 183 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 SOSTDC1Q6X4U4 206 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 KRTAP13-1Q8IUC0 172 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 EXOC3-AS1Q8N2X6 119 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 C9orf163Q8N9P6 203 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 TMEM254Q8TBM7 123 aa1.68□□□□□ -2.14
PCNX4-206ENST00000553513 C4orf3Q8WVX3 66 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms