RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 HCP5Q6MZN7 132 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 SIGLECL1Q8N7X8 197 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 DOPEY2Q9Y3R5 2298 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 PRSS46E5RG02 174 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 RPEL1Q2QD12 228 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 OR8I2Q8N0Y5 310 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 AMMECR1Q9Y4X0 333 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 IGHV4-61A0A0C4DH41 118 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 LINC00614P0C842 121 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 PAX2Q02962 417 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 CLEC2AQ6UVW9 174 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 OR11H6Q8NGC7 330 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 OR52E5Q8NH55 327 aa12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-202ENST00000541297 PTPN13Q12923 2485 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 IGHV4-30-2A0A087WSY4 118 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 SLC25A17O43808 307 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 GPX1P07203 203 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 CNTFRP26992 372 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 HTR1DP28221 377 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 MC5RP33032 325 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 VDAC2P45880 294 aaPredicted RBP12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 Q8N976 141 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 C10orf105Q8TEF2 133 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 BET1LQ9NYM9 111 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 V9GYV3 84 aa12.23□□□□□ -0.45
CLPTM1-202ENST00000541297 DIRC3C9JPN6 131 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 CD24P25063 80 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 MMDQ15546 238 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 SIRPDQ9H106 197 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
CLPTM1-202ENST00000541297 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 C9JCJ5 164 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 TOX4O94842 621 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 KRTAP10-9P60411 292 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 SLC35B1P78383 322 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 COL5A1-AS1Q5SY13 56 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 UHRF2Q96PU4 802 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 NPVFQ9HCQ7 196 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 DPM3Q9P2X0 92 aa12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 LSM4Q9Y4Z0 139 aaKnown RBP12.21□□□□□ -0.45
CLPTM1-202ENST00000541297 ODF3BA8MYP8 253 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 E7EUB6 86 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 TIMM23O14925 209 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 C10orf55Q5SWW7 151 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 STPG3Q8N7X2 389 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 OR10W1Q8NGF6 305 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 C11orf52Q96A22 123 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 RCHY1Q96PM5 261 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 NRN1Q9NPD7 142 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.46
CLPTM1-202ENST00000541297 RHOBP62745 196 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 SPATA45Q537H7 98 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 C1orf122Q6ZSJ8 110 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 RNF2Q99496 336 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 USF1P22415 310 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 CTRLP40313 264 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 AMTP48728 403 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 PLEKHA3Q9HB20 300 aa12.2□□□□□ -0.46
CLPTM1-202ENST00000541297 ACTL6BO94805 426 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 PMCHP20382 165 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 FXYD3Q14802 87 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 VMA21Q3ZAQ7 101 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 VSTM2AQ8TAG5 236 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 ZFP30Q9Y2G7 519 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 LY96Q9Y6Y9 160 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 APCP25054 2843 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 HELZ2Q9BYK8 2649 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 TRBV9A0A0B4J1U6 114 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 A0A1W2PS18 150 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 NDUFS8O00217 210 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 TCF21O43680 179 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 GNG4P50150 75 aa12.19□□□□□ -0.46
CLPTM1-202ENST00000541297 TCL1AP56279 114 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms