RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 H3BRM9 83 aa12.75□□□□□ -0.37
PCDHA4-203ENST00000530339 OR9G4Q8NGQ1 327 aa12.75□□□□□ -0.37
PCDHA4-203ENST00000530339 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
PCDHA4-203ENST00000530339 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 SLC25A48Q6ZT89 311 aaKnown RBP12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 TMEM101Q96IK0 257 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 MRPL27Q9P0M9 148 aaKnown RBP12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 PSPNO60542 156 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 TDGF1P3P51864 188 aa12.74□□□□□ -0.37
PCDHA4-203ENST00000530339 PINLYPA6NC86 204 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 F2Z2F3 143 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 IGHV2-70P01814 119 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 CRIM1Q9NZV1 1036 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 A0A0G2JRQ6 117 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 TSPAN13O95857 204 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 DNAL4O96015 105 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 IGHV1-46P01743 117 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 FOXG1P55316 489 aaPredicted RBP12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 SIGMAR1Q99720 223 aa12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
PCDHA4-203ENST00000530339 IGHV3-66A0A0C4DH42 116 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 EREGO14944 169 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 UBE2V1Q13404 147 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 ZNF581Q9P0T4 197 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 ANAPC10Q9UM13 185 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 C5orf24Q7Z6I8 188 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
PCDHA4-203ENST00000530339 IGHV2-5P01817 119 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 CD59P13987 128 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 CD33P20138 364 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 LCN12Q6JVE5 192 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 UNQ6494/PRO21346Q6UXR6 183 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 Q6ZRM9 215 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 C10orf126Q8N4M7 172 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 ERVK11-1P61568 191 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 SRSF1Q07955 248 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 THBDP07204 575 aa12.71□□□□□ -0.37
PCDHA4-203ENST00000530339 TRAV21A0A0B4J279 112 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 ITGB1BP1O14713 200 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 IGKCP01834 107 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 CLEC19AQ6UXS0 136 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 ZNF479Q96JC4 524 aa12.71□□□□□ -0.38
PCDHA4-203ENST00000530339 ETV2O00321 342 aaPredicted RBP12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 IGHV3OR16-8A0A075B7F1 116 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 DMRTA2Q96SC8 542 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 SMPXQ9UHP9 88 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 NTF4P34130 210 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 ORMDL2Q53FV1 153 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 TRGV9Q99603 122 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 C15orf62A8K5M9 175 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 OVOL1O14753 267 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 RLFQ13129 1914 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 MPV17L2Q567V2 206 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 BMPERQ8N8U9 685 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
PCDHA4-203ENST00000530339 MINOS1Q5TGZ0 78 aa12.69□□□□□ -0.38
PCDHA4-203ENST00000530339 MINOS1-NBL1R4GNA1 71 aa12.69□□□□□ -0.38
PCDHA4-203ENST00000530339 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
PCDHA4-203ENST00000530339 MDS2Q8NDY4 140 aa12.69□□□□□ -0.38
PCDHA4-203ENST00000530339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 HOXA3O43365 443 aaPredicted RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 Q0VG73 95 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 Q6P435 159 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 LY6DQ14210 128 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 POLR3KQ9Y2Y1 108 aaPredicted RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 IGKV3-20P01619 116 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 SLC25A15Q9Y619 301 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 LINC00473A8K010 186 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 TCRAP04437 139 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 C1orf147Q96MC9 270 aaPredicted RBP12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
PCDHA4-203ENST00000530339 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 B3GALT5-AS1P59052 145 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 IGHG3P01860 377 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 SPTBN1Q01082 2364 aaKnown RBP12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 TMEM262E9PQX1 116 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 CDKN1AP38936 164 aa12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 ITLN2Q8WWU7 325 aaPredicted RBP12.67□□□□□ -0.38
PCDHA4-203ENST00000530339 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms