RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
CTNND1-220ENST00000529526 A0A0U1RRA0 63 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 FAM90A9PA6NNJ1 464 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 SRRM5B3KS81 715 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 TMEM178BH3BS89 294 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 KLF17Q5JT82 389 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-220ENST00000529526 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 CYTL1Q9NRR1 136 aa6.69□□□□□ -1.34
CTNND1-220ENST00000529526 NHP2Q9NX24 153 aaKnown RBP6.69□□□□□ -1.34
CTNND1-220ENST00000529526 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 NCR2O95944 276 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 HBDP02042 147 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 CD28P10747 220 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 HEATR5BQ9P2D3 2071 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 PSG1P11464 419 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 SEPSECSQ9HD40 501 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RPUSD1Q9UJJ7 312 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 SLC25A15Q9Y619 301 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 IGKV1-5P01602 117 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 NPC2P61916 151 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 TPTE2P1Q5T6R2 138 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 SLC25A39Q9BZJ4 359 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-220ENST00000529526 LY6HO94772 140 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 LHFPL1Q86WI0 220 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 TSKUQ8WUA8 353 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 GAFA1Q96PS6 74 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 LAMTOR2Q9Y2Q5 125 aa6.68□□□□□ -1.34
CTNND1-220ENST00000529526 LINC00473A8K010 186 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 DPM2O94777 84 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 DUSP14O95147 198 aaKnown RBP6.67□□□□□ -1.34
CTNND1-220ENST00000529526 C19orf67A6NJJ6 358 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 SRSF7Q16629 238 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■□□□ 13.9
CTNND1-220ENST00000529526 HEPN1Q6WQI6 88 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 IGKCP01834 107 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 CYSLTR1Q9Y271 337 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 SAP30O75446 220 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 LYPD2Q6UXB3 125 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 CRIM1Q9NZV1 1036 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 H0YJW9 148 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 SAMD13Q5VXD3 122 aa6.67□□□□□ -1.34
CTNND1-220ENST00000529526 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 MAJINQ3KP22 176 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 CD300EQ496F6 205 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-220ENST00000529526 GTSCR1Q86UQ5 136 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 C17orf82Q86X59 251 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-220ENST00000529526 MDS2Q8NDY4 140 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 RIPPLY3P57055 190 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 PAX2Q02962 417 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 Q6P435 159 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 SLC25A48Q6ZT89 311 aaKnown RBP6.66□□□□□ -1.34
CTNND1-220ENST00000529526 Q8TAT8 98 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 TNFRSF14Q92956 283 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 TRAV9-2A0A087WT02 112 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 ZNF815PA8K554 130 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 D6R8Y8 96 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 STAG3L3P0CL85 134 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 COL8A2P25067 703 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 EFNA4P52798 201 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 B3GALT5-AS1P59052 145 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 OVOL1O14753 267 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 TCRAP04437 139 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 CD5P06127 495 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 BMPERQ8N8U9 685 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 TRPM7Q96QT4 1865 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 IGKV1D-17A0A075B6S4 117 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 A6NNC1 897 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 NXT2Q9NPJ8 142 aaKnown RBP6.66□□□□□ -1.34
CTNND1-220ENST00000529526 ZNRD1Q9P1U0 126 aa6.66□□□□□ -1.34
CTNND1-220ENST00000529526 H3BUX3 64 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 NTF4P34130 210 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 ERVK11-1P61568 191 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 NMSQ5H8A3 153 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 ZNF474Q6S9Z5 364 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-220ENST00000529526 C20orf204Q6ZNR8 217 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 RNF182Q8N6D2 247 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 HIST1H2BLQ99880 126 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 AGMATQ9BSE5 352 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 CHCHD5Q9BSY4 110 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 BUB1B-PAK6H3BSN5 160 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 NDUFS8O00217 210 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 IGHV3-53P01767 116 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.34
CTNND1-220ENST00000529526 DOCK6Q96HP0 2047 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 RALGAPA1Q6GYQ0 2036 aa6.65□□□□□ -1.34
CTNND1-220ENST00000529526 TRAV8-2A0A0B4J237 113 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 QRFPP83859 136 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 CLDN16Q9Y5I7 305 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms