RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 OR4X1Q8NH49 305 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 OR2T6Q8NHC8 308 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 ZNF418Q8TF45 676 aaPredicted RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 GATAD1Q8WUU5 269 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 NPIPB3Q92617 1050 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 RAB24Q969Q5 203 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 NOL4LQ96MY1 436 aaPredicted RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 SEC11CQ9BY50 192 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 VSIRQ9H7M9 311 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 TECRQ9NZ01 308 aaKnown RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 MRPL36Q9P0J6 103 aaKnown RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 RFNGQ9Y644 331 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 FBN3Q75N90 2809 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 H3BUA1 57 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 GNG7O60262 68 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 IGLV1-40P01703 118 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 HSPB1P04792 205 aaKnown RBP6.65□□□□□ -1.34
VAPB-206ENST00000520497 CD5P06127 495 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 SFTA3P0C7M3 94 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 LINC00869P0C866 280 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 HAGHQ16775 308 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 C10orf113Q5VZT2 155 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 SPSB3Q6PJ21 355 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 SVBPQ8N300 66 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 SUN5Q8TC36 379 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 VN1R17PQ8TDU5 208 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 TXN2Q99757 166 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 SLC35B3Q9H1N7 401 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 TMEM167BQ9NRX6 74 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 ZNF355PQ9NSJ1 428 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 FUT9Q9Y231 359 aa6.65□□□□□ -1.34
VAPB-206ENST00000520497 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
VAPB-206ENST00000520497 CLN5O75503 358 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 OR2J3O76001 311 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 YIF1AO95070 293 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 NDUFB8O95169 186 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 SNAPINO95295 136 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 IGHV3-48P01763 117 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 IGHG4P01861 327 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 APOC3P02656 99 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 FCGR2BP31994 310 aaPredicted RBP6.64□□□□□ -1.35
VAPB-206ENST00000520497 FGF8P55075 233 aaPredicted RBP6.64□□□□□ -1.35
VAPB-206ENST00000520497 DEFA5Q01523 94 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 ZNF726P1Q15940 193 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 Q56UQ5 140 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 FAM78BQ5VT40 261 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 PQLC2Q6ZP29 291 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 Q6ZSV7 163 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 NECAP1Q8NC96 275 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 STXBP6Q8NFX7 210 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 LINC00052Q96N35 136 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 JMJD8Q96S16 334 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 TMEM231Q9H6L2 316 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 DNAJC4Q9NNZ3 241 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 SERTAD4Q9NUC0 356 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 C21orf62Q9NYP8 219 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
VAPB-206ENST00000520497 CARHSP1Q9Y2V2 147 aaKnown RBP6.64□□□□□ -1.35
VAPB-206ENST00000520497 IGHV3-21A0A0B4J1V1 117 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 TMEM89A2RUT3 159 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 HYPMO75409 117 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 OR5G3P0C626 314 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 IGLC1P0CG04 106 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 STAG3L2P0CL84 134 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 STAG3L3P0CL85 134 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 PSMB8P28062 276 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 RHOGP84095 191 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
VAPB-206ENST00000520497 C15orf32Q32M92 178 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 SOHLH1Q5JUK2 328 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 EEF1AKMT3Q96AZ1 226 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 UHRF2Q96PU4 802 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 ATP6V0BQ99437 205 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 ARL2-SNX15V9GYD0 113 aa6.63□□□□□ -1.35
VAPB-206ENST00000520497 TRBV7-1A0A0A6YYK4 115 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 F6UZH7 168 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 HMGB3O15347 200 aaKnown RBP6.62□□□□□ -1.35
VAPB-206ENST00000520497 NUPL2O15504 423 aaKnown RBP6.62□□□□□ -1.35
VAPB-206ENST00000520497 PDE6DO43924 150 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 OR7C2O60412 319 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 TOMM40O96008 361 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 IGKV1-17P01599 117 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 RD3LP0DJH9 198 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 ARL14EPLP0DKL9 152 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 C8orf88P0DMB2 117 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 YPEL3P61236 119 aaPredicted RBP6.62□□□□□ -1.35
VAPB-206ENST00000520497 ICAM4Q14773 271 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms