RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ADGBQ8N7X0 1667 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 RIC1Q4ADV7 1423 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 DNAH12Q6ZR08 3092 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 OR51F1A6NGY5 319 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 C1orf196B1AJZ1 125 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 C3orf84H3BNL1 204 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 TAX1BP3O14907 124 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 METTL15P1P0C7V9 234 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 S100GP29377 79 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 SRP14P37108 136 aaKnown RBP1.98□□□□□ -2.09
SQLE-204ENST00000520493 EIF2B2P49770 351 aaKnown RBP1.98□□□□□ -2.09
SQLE-204ENST00000520493 RAB4BP61018 213 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 EIF5AP63241 154 aaKnown RBP1.98□□□□□ -2.09
SQLE-204ENST00000520493 SS18Q15532 418 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 TMEM128Q5BJH2 165 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 BCL2L15Q5TBC7 163 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 DEFB128Q7Z7B8 93 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 C12orf29Q8N999 325 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 WFDC5Q8TCV5 224 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 HIST1H2BLQ99880 126 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 LRTM1Q9HBL6 345 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 SCAF11Q99590 1463 aaKnown RBP1.98□□□□□ -2.09
SQLE-204ENST00000520493 CPAMD8Q8IZJ3 1885 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 LTBP2Q14767 1821 aa1.98□□□□□ -2.09
SQLE-204ENST00000520493 LRRK2Q5S007 2527 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 RYR1P21817 5038 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 OBSL1O75147 1896 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 ZCCHC6Q5VYS8 1495 aaKnown RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 C7orf71A4D174 169 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 M0R378 163 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 IFNA14P01570 189 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 CLPSP04118 112 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 IGKV4-1P06312 121 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 HTR1AP08908 422 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 SCGB1A1P11684 91 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 RNASE4P34096 147 aaKnown RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 HINT1P49773 126 aaPredicted RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 ERHP84090 104 aaKnown RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 LTC4SQ16873 150 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 ZNF791Q3KP31 576 aaPredicted RBP1.97□□□□□ -2.09
SQLE-204ENST00000520493 Q6ZTI0 123 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 TMEM86AQ8N2M4 240 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 OR13D1Q8NGV5 346 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 TEX37Q96LM6 180 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 C8orf4Q9NR00 106 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 PCTPQ9UKL6 214 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 NESP48681 1621 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 CCDC88AQ3V6T2 1871 aa1.97□□□□□ -2.09
SQLE-204ENST00000520493 CAMSAP2Q08AD1 1489 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 NHSL1Q5SYE7 1610 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 TMSB15BA0A087X1C1 80 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 TRGV10A0A0A0MS01 117 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 FUOMA2VDF0 154 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 TLCD2A6NGC4 264 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 RFPL4AA6NLU0 287 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 RFPL4AL1F8VTS6 287 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 FAM107AO95990 144 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 CSRP1P21291 193 aaKnown RBP1.96□□□□□ -2.1
SQLE-204ENST00000520493 ARPC4P59998 168 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 TMEM258P61165 79 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 UBE2BP63146 152 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 RELAQ04206 551 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 KHDC3LQ587J8 217 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 SAMD13Q5VXD3 122 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 C22orf39Q6P5X5 142 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 DPPA3Q6W0C5 159 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 ANGPTL5Q86XS5 388 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 TMEM35BQ8NCS4 154 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 OR4X2Q8NGF9 303 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 STAG3L4Q8TBR4 150 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 RMND5BQ96G75 393 aaPredicted RBP1.96□□□□□ -2.1
SQLE-204ENST00000520493 GPX7Q96SL4 187 aaPredicted RBP1.96□□□□□ -2.1
SQLE-204ENST00000520493 EFCAB11Q9BUY7 163 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
SQLE-204ENST00000520493 MED11Q9P086 117 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 NUBP2Q9Y5Y2 271 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 ADAMTS7Q9UKP4 1686 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 PTPRBP23467 1997 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 DOCK4Q8N1I0 1966 aa1.96□□□□□ -2.1
SQLE-204ENST00000520493 RAPGEF6Q8TEU7 1601 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 NCAPD3P42695 1498 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 FBN2P35556 2912 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 CCDC168Q8NDH2 2452 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 HMSDA8MTL9 139 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 FNDC10F2Z333 226 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 LY6LH3BQJ8 138 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 CST8O60676 142 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 TRGC2P03986 189 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 DEFA4P12838 97 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 NFYBP25208 207 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 SARNPP82979 210 aaKnown RBP1.95□□□□□ -2.1
SQLE-204ENST00000520493 PLCXD2Q0VAA5 305 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 SURF2Q15527 256 aaPredicted RBP1.95□□□□□ -2.1
SQLE-204ENST00000520493 DHFR2Q86XF0 187 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 OR5A1Q8NGJ0 315 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 OR9Q1Q8NGQ5 310 aa1.95□□□□□ -2.1
SQLE-204ENST00000520493 GRPEL2Q8TAA5 225 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms