RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 EREGO14944 169 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 NDUFS7O75251 213 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 IGLV2-8P01709 118 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 C19orf35Q6ZS72 473 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF596Q8TC21 504 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 ST6GALNAC6Q969X2 333 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 TMEM133Q9H2Q1 129 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF430Q9H8G1 570 aaPredicted RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 GNB4Q9HAV0 340 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 MRPL27Q9P0M9 148 aaKnown RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 DOPEY1Q5JWR5 2465 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 ZFHX3Q15911 3703 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 FLNBO75369 2602 aaKnown RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 COX7A2P2O60397 106 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 FSTL3O95633 263 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 MC5RP33032 325 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 UBE2L3P68036 154 aaKnown RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 C10orf113Q5VZT2 155 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 DTX2Q86UW9 622 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 THAP8Q8NA92 274 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 OR9G1Q8NH87 305 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 GRAMD2BQ96HH9 432 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 SLC25A2Q9BXI2 301 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 AMMECR1Q9Y4X0 333 aaPredicted RBP8.85□□□□□ -0.99
SH3RF1-203ENST00000508685 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 IGHV2-26A0A0B4J1V2 119 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 PPIAL4CA0A0B4J2A2 164 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 TCRBV4S1A1TA0A5B7 111 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 C22orf46C9J442 243 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 ZNF253O75346 499 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 APCSP02743 223 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 PPIAL4GP0DN37 164 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 MGST1P10620 155 aaKnown RBP8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 OR8B3Q8NGG8 313 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 OR8B2Q96RD0 313 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 PAXXQ9BUH6 204 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 RNASE7Q9H1E1 156 aaKnown RBP8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 ARHGAP32A7KAX9 2087 aa8.84□□□□□ -0.99
SH3RF1-203ENST00000508685 PTPN13Q12923 2485 aa8.84□□□□□ -1
SH3RF1-203ENST00000508685 ZNF124Q15973 351 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 VMA21Q3ZAQ7 101 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 HECTD1Q9ULT8 2610 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 DOPEY2Q9Y3R5 2298 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 RPLP1P05386 114 aaKnown RBP8.83□□□□□ -1
SH3RF1-203ENST00000508685 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
SH3RF1-203ENST00000508685 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
SH3RF1-203ENST00000508685 LGALS7P47929 136 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 ZNF137PP52743 207 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 VN1R17PQ8TDU5 208 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 NEU4Q8WWR8 484 aaPredicted RBP8.83□□□□□ -1
SH3RF1-203ENST00000508685 TIMD4Q96H15 378 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 NRN1Q9NPD7 142 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 ONECUT1Q9UBC0 465 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 WASHC3Q9Y3C0 194 aa8.83□□□□□ -1
SH3RF1-203ENST00000508685 A0A1W2PS18 150 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 DIRC3C9JPN6 131 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 ZNF324O75467 553 aaPredicted RBP8.82□□□□□ -1
SH3RF1-203ENST00000508685 IGLV1-47P01700 117 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 COX7A1P24310 79 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 AMTP48728 403 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 PRRX1P54821 245 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 MOB3BQ86TA1 216 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 OR10W1Q8NGF6 305 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 C22orf15Q8WYQ4 148 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 MBD6Q96DN6 1003 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 PERPQ96FX8 193 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 RITA1Q96K30 269 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 RBM14Q96PK6 669 aaKnown RBP8.82□□□□□ -1
SH3RF1-203ENST00000508685 TBL2Q9Y4P3 447 aaKnown RBP8.82□□□□□ -1
SH3RF1-203ENST00000508685 CENPEQ02224 2701 aa8.82□□□□□ -1
SH3RF1-203ENST00000508685 BMPR1BO00238 502 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 PEX7O00628 323 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 GAGE1Q13065 139 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 FXYD3Q14802 87 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 CYB5R2Q6BCY4 276 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 ZNF329Q86UD4 541 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 KLHDC1Q8N7A1 406 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 OR2T6Q8NHC8 308 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 BORCS7Q96B45 105 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 ZNF355PQ9NSJ1 428 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 NAV3Q8IVL0 2385 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 SRIP30626 198 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 COMPP49747 757 aaPredicted RBP8.81□□□□□ -1
SH3RF1-203ENST00000508685 KRTDAPP60985 99 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 PAX2Q02962 417 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 KLF5Q13887 457 aaPredicted RBP8.81□□□□□ -1
SH3RF1-203ENST00000508685 PMCHL1Q16048 86 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 MLANAQ16655 118 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms