RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SLC25A40Q8TBP6 338 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 TEX47Q8TBZ9 253 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 GNPDA2Q8TDQ7 276 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 ZNF418Q8TF45 676 aaPredicted RBP0.75□□□□□ -2.29
CD46-218ENST00000496723 C4orf3Q8WVX3 66 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 RNF122Q9H9V4 155 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 NMNAT1Q9HAN9 279 aaPredicted RBP0.75□□□□□ -2.29
CD46-218ENST00000496723 UQCC1Q9NVA1 299 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 IDI2-AS1Q9NZ38 188 aa0.75□□□□□ -2.29
CD46-218ENST00000496723 KIAA1549Q9HCM3 1950 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 ALPK3Q96L96 1907 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 TRBV6-8A0A0A6YYG3 113 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 TRAV3A0A0B4J244 114 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 LYZL6O75951 148 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 OR7C1O76099 320 aaPredicted RBP0.74□□□□□ -2.29
CD46-218ENST00000496723 S100A6P06703 90 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 ERP29P30040 261 aaKnown RBP0.74□□□□□ -2.29
CD46-218ENST00000496723 FADDQ13158 208 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 LIN52Q52LA3 116 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 LINC00526Q96FQ7 95 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 SIGMAR1Q99720 223 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 C6orf62Q9GZU0 229 aaPredicted RBP0.74□□□□□ -2.29
CD46-218ENST00000496723 RNASE7Q9H1E1 156 aaKnown RBP0.74□□□□□ -2.29
CD46-218ENST00000496723 C14orf132Q9NPU4 83 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 ACER3Q9NUN7 267 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 UTP11Q9Y3A2 253 aaKnown RBP0.74□□□□□ -2.29
CD46-218ENST00000496723 RIMBP3CA6NJZ7 1639 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 RIMBP3BA6NNM3 1639 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 RIMBP3Q9UFD9 1639 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 DOCK4Q8N1I0 1966 aa0.74□□□□□ -2.29
CD46-218ENST00000496723 ZFYVE9O95405 1425 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 FMN1Q68DA7 1419 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 FBN2P35556 2912 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 MYO18AQ92614 2054 aaKnown RBP0.73□□□□□ -2.29
CD46-218ENST00000496723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.73□□□□□ -2.29
CD46-218ENST00000496723 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
CD46-218ENST00000496723 ESRGQ1W209 222 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 Q8N814 137 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 WFDC5Q8TCV5 224 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 OBSCN-AS1Q96MR7 158 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 PRAP1Q96NZ9 151 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 ARL2BPQ9Y2Y0 163 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 CAMSAP1Q5T5Y3 1602 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 NUP98P52948 1817 aa0.73□□□□□ -2.29
CD46-218ENST00000496723 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
CD46-218ENST00000496723 PCF11O94913 1555 aaKnown RBP0.72□□□□□ -2.29
CD46-218ENST00000496723 CLDN25C9JDP6 229 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 M0R2N4 97 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 SRP14P37108 136 aaKnown RBP0.72□□□□□ -2.29
CD46-218ENST00000496723 CTAG1AP78358 180 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 REEP5Q00765 189 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 C1orf137Q5JT78 98 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 GDF5OSQ5U4N7 250 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 C3orf56Q8N813 242 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 SLC30A7Q8NEW0 376 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 SLAMF6Q96DU3 332 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 ADAT3Q96EY9 351 aaPredicted RBP0.72□□□□□ -2.29
CD46-218ENST00000496723 YPEL2Q96QA6 119 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 LINC00467Q9BRT7 94 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 BCL2L10Q9HD36 194 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 ZFP30Q9Y2G7 519 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 FAM32AQ9Y421 112 aaKnown RBP0.72□□□□□ -2.29
CD46-218ENST00000496723 LAMA4Q16363 1823 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 MYH2Q9UKX2 1941 aa0.72□□□□□ -2.29
CD46-218ENST00000496723 ADGRB2O60241 1585 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 TRGV10A0A0A0MS01 117 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 TRAV4A0A0B4J268 109 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 SERPINA1P01009 418 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 IFNA6P05013 189 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 CTXN2P0C2S0 81 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 PIGPP57054 158 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 DEFA3P59666 94 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 ERVS71-1P61550 626 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 KRR1Q13601 381 aaKnown RBP0.71□□□□□ -2.3
CD46-218ENST00000496723 DEFB113Q30KQ7 82 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 BCL2L15Q5TBC7 163 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 TEX261Q6UWH6 196 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 OR11H6Q8NGC7 330 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 TMEM254Q8TBM7 123 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 PRADC1Q9BSG0 188 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 PARVBQ9HBI1 364 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 ENY2Q9NPA8 101 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 U3KQ87 197 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 PTPRFP10586 1907 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 E9PCH4 1651 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 SIP14410 1827 aa0.71□□□□□ -2.3
CD46-218ENST00000496723 MYO5AQ9Y4I1 1855 aaKnown RBP0.7□□□□□ -2.3
CD46-218ENST00000496723 TRBV19A0A075B6N1 114 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 TMEM210A6NLX4 147 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 ZNF736B4DX44 427 aaPredicted RBP0.7□□□□□ -2.3
CD46-218ENST00000496723 INE1O15225 51 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 GADD45GO95257 159 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 IFNA7P01567 189 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 SRIP30626 198 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 MRPS25P82663 173 aaKnown RBP0.7□□□□□ -2.3
CD46-218ENST00000496723 TMED2Q15363 201 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 MPV17LQ2QL34 196 aa0.7□□□□□ -2.3
CD46-218ENST00000496723 SOSTDC1Q6X4U4 206 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms