RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HMGB3O15347 200 aaKnown RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 MRPS14O60783 128 aaKnown RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 GGCTO75223 188 aaKnown RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TNFSF15O95150 251 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 GADD45GO95257 159 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TSPAN19P0C672 248 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SMIM17P0DL12 118 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 S100A4P26447 101 aaKnown RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 ATP5G3P48201 142 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 PIGPP57054 158 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 GNG5P63218 68 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SELENOWP63302 87 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 NEDD8Q15843 81 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TEX261Q6UWH6 196 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TOMM20LQ6UXN7 152 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 MIR17HGQ75NE6 70 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TRAPPC6BQ86SZ2 158 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 PDZD9Q8IXQ8 264 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 EXOC3-AS1Q8N2X6 119 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 NUP35Q8NFH5 326 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 PFN4Q8NHR9 129 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 C1orf54Q8WWF1 131 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 MALSU1Q96EH3 234 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SCGB3A1Q96QR1 104 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TP53RKQ96S44 253 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 GPER1Q99527 375 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 LXNQ9BS40 222 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 EFCAB11Q9BUY7 163 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 LINC00470Q9BZP3 86 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM133Q9H2Q1 129 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 CST9LQ9H4G1 147 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 POPDC3Q9HBV1 291 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 MED29Q9NX70 200 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SCN3BQ9NY72 215 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 CALML5Q9NZT1 146 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 NAT8Q9UHE5 227 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 ERG28Q9UKR5 140 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 LAMTOR2Q9Y2Q5 125 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 AMMECR1Q9Y4X0 333 aaPredicted RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 CACNA1DQ01668 2161 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 LCTP09848 1927 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 FAM135BQ49AJ0 1406 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 MIA2Q96PC5 1412 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 SYNMO15061 1565 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF638Q14966 1978 aaKnown RBP1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TRIOBPQ9H2D6 2365 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM2Q9UHN6 1383 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF407Q9C0G0 2248 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SIPA1L1O43166 1804 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 A0A0D9SG52 128 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 LOC107984640A0A0U1RRK4 108 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SPAARA0A1B0GVQ0 90 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SMIM31A0A1B0GVY4 71 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 A0A1B0GW64 132 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 C20orf202A1L168 122 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 LY6LH3BQJ8 138 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 K7ERU9 68 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 TPST1O60507 370 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 PGLYRP1O75594 196 aaPredicted RBP1.11□□□□□ -2.23
LMNB1-207ENST00000494185 MPC2O95563 127 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 TCL1BO95988 128 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 IFNA17P01571 189 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 UBBP0CG47 229 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 FGF7P21781 194 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 BRS3P32247 399 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 PPP3R1P63098 170 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SUPT4H1P63272 117 aaKnown RBP1.11□□□□□ -2.23
LMNB1-207ENST00000494185 BTG2P78543 158 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 RHOGP84095 191 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SS18Q15532 418 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 OR8B8Q15620 311 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 KISS1Q15726 138 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 LTC4SQ16873 150 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 RRN3P1Q2M238 152 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 Q5XG85 94 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 Q6ZTI0 123 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ACBD7Q8N6N7 88 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF439Q8NDP4 499 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 OR51T1Q8NGJ9 327 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SKA2Q8WVK7 121 aaPredicted RBP1.11□□□□□ -2.23
LMNB1-207ENST00000494185 CANT1Q8WVQ1 401 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM106AQ96A25 262 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 PLEKHB2Q96CS7 222 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ZC2HC1AQ96GY0 325 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 TEX37Q96LM6 180 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 LYSMD1Q96S90 227 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 HSPB9Q9BQS6 159 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 DOHHQ9BU89 302 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 PBDC1Q9BVG4 233 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 REG4Q9BYZ8 158 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM126AQ9H061 195 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 SPANXA1Q9NS26 97 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 COPZ2Q9P299 210 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 METTL1Q9UBP6 276 aaKnown RBP1.11□□□□□ -2.23
LMNB1-207ENST00000494185 NAT8BQ9UHF3 227 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 OVOS2A0A0J9YW53 1432 aa1.11□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF609O15014 1411 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms