RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 PAIP2BQ9ULR5 123 aaKnown RBP13.19□□□□□ -0.3
PTPRU-207ENST00000492954 IGKV1D-37A0A075B6S9 117 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 FAM90A26D6RGX4 464 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 ATF4P18848 351 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-207ENST00000492954 ZNF90Q03938 601 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 GGNBP1Q5YKI7 109 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 TMEM217Q8N7C4 229 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 SDHCQ99643 169 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-207ENST00000492954 PBDC1Q9BVG4 233 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
PTPRU-207ENST00000492954 ALMS1Q8TCU4 4167 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 LINC00854A0A1B0GVQ3 168 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 BUB3O43684 328 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 MED6O75586 246 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 NDUFB6O95139 128 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
PTPRU-207ENST00000492954 RAB11AP62491 216 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 TRPT1Q86TN4 253 aaKnown RBP13.17□□□□□ -0.3
PTPRU-207ENST00000492954 FLVCR2Q9UPI3 526 aa13.17□□□□□ -0.3
PTPRU-207ENST00000492954 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 WRBO00258 174 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 SYNGR2O43760 224 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-207ENST00000492954 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-207ENST00000492954 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-207ENST00000492954 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
PTPRU-207ENST00000492954 ADAP1O75689 374 aa13.15□□□□□ -0.3
PTPRU-207ENST00000492954 LYZP61626 148 aa13.15□□□□□ -0.3
PTPRU-207ENST00000492954 OR2F1Q13607 317 aa13.15□□□□□ -0.3
PTPRU-207ENST00000492954 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-207ENST00000492954 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
PTPRU-207ENST00000492954 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 DEFB4AO15263 64 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 SPP1P10451 314 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 C4BPBP20851 252 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 BTCP35070 178 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 OR8G2PQ6IF36 304 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 MORN3Q6PF18 240 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-207ENST00000492954 TRGV9Q99603 122 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
PTPRU-207ENST00000492954 AGRNO00468 2067 aa13.14□□□□□ -0.31
PTPRU-207ENST00000492954 PRSS46E5RG02 174 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 H3BP45 60 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 FABP1P07148 127 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
PTPRU-207ENST00000492954 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-207ENST00000492954 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
PTPRU-207ENST00000492954 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
PTPRU-207ENST00000492954 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 THAP8Q8NA92 274 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 LINC00476Q8WZB0 136 aa13.13□□□□□ -0.31
PTPRU-207ENST00000492954 SNRPGP15A8MWD9 76 aa13.12□□□□□ -0.31
PTPRU-207ENST00000492954 OR4E1P0C645 316 aa13.12□□□□□ -0.31
PTPRU-207ENST00000492954 IL7P13232 177 aa13.12□□□□□ -0.31
PTPRU-207ENST00000492954 NANOS2P60321 138 aaKnown RBP13.12□□□□□ -0.31
PTPRU-207ENST00000492954 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
PTPRU-207ENST00000492954 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-207ENST00000492954 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
PTPRU-207ENST00000492954 HYDINQ4G0P3 5121 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 CENPXA8MT69 81 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPRU-207ENST00000492954 ID3Q02535 119 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 TMEM41BQ5BJD5 291 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
PTPRU-207ENST00000492954 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
PTPRU-207ENST00000492954 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 FBXL17Q9UF56 701 aa13.11□□□□□ -0.31
PTPRU-207ENST00000492954 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
PTPRU-207ENST00000492954 STRAPQ9Y3F4 350 aaKnown RBP13.11□□□□□ -0.31
PTPRU-207ENST00000492954 LY6G6CO95867 125 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 GSG1LQ6UXU4 331 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 Q8NAQ8 132 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 PPP1R14BQ96C90 147 aa13.1□□□□□ -0.31
PTPRU-207ENST00000492954 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
PTPRU-207ENST00000492954 IGHV4-28A0A0C4DH34 117 aa13.09□□□□□ -0.31
PTPRU-207ENST00000492954 IFNA21P01568 189 aa13.09□□□□□ -0.31
PTPRU-207ENST00000492954 NKX2-1P43699 371 aaPredicted RBP13.09□□□□□ -0.31
PTPRU-207ENST00000492954 C1orf194Q5T5A4 169 aa13.09□□□□□ -0.31
PTPRU-207ENST00000492954 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
PTPRU-207ENST00000492954 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
PTPRU-207ENST00000492954 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-207ENST00000492954 H3BMM0 161 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 SSSCA1O60232 199 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 RBMY1A1P0DJD3 496 aaKnown RBP13.08□□□□□ -0.32
PTPRU-207ENST00000492954 RBMY1CP0DJD4 496 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 GATA2P23769 480 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-207ENST00000492954 DEFB1P60022 68 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 AKR1C1Q04828 323 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 RBMY1FQ15415 496 aaKnown RBP13.08□□□□□ -0.32
PTPRU-207ENST00000492954 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms