RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 STXBP6Q8NFX7 210 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
PABPC4-216ENST00000492468 IGLV1-44P01699 117 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 APOA2P02652 100 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
PABPC4-216ENST00000492468 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 NBEAQ8NFP9 2946 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 NAV3Q8IVL0 2385 aa11.91□□□□□ -0.5
PABPC4-216ENST00000492468 E7EUB6 86 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 SNAI2O43623 268 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 NCR2O95944 276 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 LHBP01229 141 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 IGFBP4P22692 258 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 GUSBP1Q15486 140 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 TEX45Q8NA69 505 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 C1orf162Q8NEQ5 155 aaPredicted RBP11.9□□□□□ -0.5
PABPC4-216ENST00000492468 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 PERPQ96FX8 193 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
PABPC4-216ENST00000492468 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 C16orf54Q6UWD8 224 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
PABPC4-216ENST00000492468 LINC00574Q9H8X3 128 aa11.9□□□□□ -0.5
PABPC4-216ENST00000492468 A6NDN8 102 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 CIDEAO60543 219 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 TCRAP04437 139 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 DUX4L9Q6RFH8 374 aaPredicted RBP11.89□□□□□ -0.51
PABPC4-216ENST00000492468 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 GATD1Q8NB37 220 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
PABPC4-216ENST00000492468 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 RAI1Q7Z5J4 1906 aaPredicted RBP11.89□□□□□ -0.51
PABPC4-216ENST00000492468 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 CSN3P07498 182 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 TMEM11P17152 192 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 RBMXL3Q8N7X1 1067 aaKnown RBP11.89□□□□□ -0.51
PABPC4-216ENST00000492468 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 HEATR1Q9H583 2144 aaKnown RBP11.89□□□□□ -0.51
PABPC4-216ENST00000492468 ZNRD1Q9P1U0 126 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
PABPC4-216ENST00000492468 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 C9orf172C9J069 976 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 GP9P14770 177 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 Q86TA4 180 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 ZCCHC24Q8N2G6 241 aaKnown RBP11.88□□□□□ -0.51
PABPC4-216ENST00000492468 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
PABPC4-216ENST00000492468 H3BUT2 72 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 FAM201AQ5SY85 155 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 PEAR1Q5VY43 1037 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-216ENST00000492468 ZNF833PQ6ZTB9 187 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 OR1N2Q8NGR9 330 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 OR10AG1Q8NH19 301 aa11.88□□□□□ -0.51
PABPC4-216ENST00000492468 CEACAM3P40198 252 aa11.87□□□□□ -0.51
PABPC4-216ENST00000492468 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
PABPC4-216ENST00000492468 RND1Q92730 232 aa11.87□□□□□ -0.51
PABPC4-216ENST00000492468 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
PABPC4-216ENST00000492468 TIMM8BQ9Y5J9 83 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-216ENST00000492468 KNTC1P50748 2209 aa11.87□□□□□ -0.51
PABPC4-216ENST00000492468 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
PABPC4-216ENST00000492468 C22orf46C9J442 243 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 COL8A1P27658 744 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 CSN1S1P47710 185 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 HSD52Q0P140 79 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 KIR3DS1Q14943 382 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 CNEP1R1Q8N9A8 125 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 Q9H3A6 140 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 SIT1Q9Y3P8 196 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 A0A096LNJ9 63 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 M0R296 226 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 ORM2P19652 201 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 ACP1P24666 158 aa11.86□□□□□ -0.51
PABPC4-216ENST00000492468 A0A1B0GUT8 65 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 KIR2DL2P43627 348 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-216ENST00000492468 C10orf55Q5SWW7 151 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 CLEC2AQ6UVW9 174 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 FA2HQ7L5A8 372 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 WFDC8Q8IUA0 241 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 MAFAQ8NHW3 353 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-216ENST00000492468 GAFA1Q96PS6 74 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-216ENST00000492468 SUB1P53999 127 aaKnown RBP eCLIP11.85□□□□□ -0.516e-7■■■■■ 34.1
PABPC4-216ENST00000492468 RBPJQ06330 500 aa11.85□□□□□ -0.51
PABPC4-216ENST00000492468 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms