RNA–Protein interactions for RNA: ENST00000485213.1

RBM3-206, Transcript of RNA binding motif protein 3, human

TSL 2

Gene RBM3, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-206	ENST00000485213		A0A1W2PS18	150 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	DNASE2	O00115	360 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	WRB	O00258	174 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	BMI1	P35226	326 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	PAX9	P55771	341 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	ATP5I	P56385	69 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	RPL11	P62913	178 aa	Known RBP	13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	THAP8	Q8NA92	274 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	C7orf50	Q9BRJ6	194 aa	Known RBP	13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	TMEM231	Q9H6L2	316 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	ALMS1	Q8TCU4	4167 aa		13.57	□□□□□ -0.24
RBM3-206	ENST00000485213	KNCN	A6PVL3	124 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	PMS2P5	A8MQ11	134 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213		H3BP45	60 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	CCNK	O75909	580 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	ZNF688	P0C7X2	276 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	INPP1	P49441	399 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	CMC4	P56277	68 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	POLR2G	P62487	172 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	PAFAH1B2	P68402	229 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	IL17D	Q8TAD2	202 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	RNF125	Q96EQ8	232 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	GRAMD2B	Q96HH9	432 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	C17orf77	Q96MU5	243 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	CSTL1	Q9H114	145 aa		13.56	□□□□□ -0.24
RBM3-206	ENST00000485213	OR2F1	Q13607	317 aa		13.55	□□□□□ -0.24
RBM3-206	ENST00000485213	TRPT1	Q86TN4	253 aa	Known RBP	13.55	□□□□□ -0.24
RBM3-206	ENST00000485213	SLC35E1	Q96K37	410 aa		13.55	□□□□□ -0.24
RBM3-206	ENST00000485213	HYDIN	Q4G0P3	5121 aa		13.55	□□□□□ -0.24
RBM3-206	ENST00000485213		A6NHS1	94 aa		13.54	□□□□□ -0.24
RBM3-206	ENST00000485213	LYRM1	O43325	122 aa		13.54	□□□□□ -0.24
RBM3-206	ENST00000485213	SCGB2A1	O75556	95 aa		13.54	□□□□□ -0.24
RBM3-206	ENST00000485213	MED6	O75586	246 aa		13.54	□□□□□ -0.24
RBM3-206	ENST00000485213	TRGV9	Q99603	122 aa		13.54	□□□□□ -0.24
RBM3-206	ENST00000485213	PIGBOS1	A0A0B4J2F0	54 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	ZFP92	A6NM28	416 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	C4BPB	P20851	252 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	DEFB1	P60022	68 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	SPANXN5	Q5MJ07	72 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	MITD1	Q8WV92	249 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	C20orf85	Q9H1P6	137 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	TBC1D24	Q9ULP9	559 aa		13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	PAIP2B	Q9ULR5	123 aa	Known RBP	13.53	□□□□□ -0.24
RBM3-206	ENST00000485213	GATA2	P23769	480 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	EIF2B2	P49770	351 aa	Known RBP	13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	CNPY1	Q3B7I2	92 aa		13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	C4orf46	Q504U0	113 aa		13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	COQ8A	Q8NI60	647 aa		13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	CIB3	Q96Q77	187 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	SEC22C	Q9BRL7	303 aa		13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	PBDC1	Q9BVG4	233 aa		13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	WDR12	Q9GZL7	423 aa	Known RBP	13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	RCL1	Q9Y2P8	373 aa	Known RBP	13.52	□□□□□ -0.25
RBM3-206	ENST00000485213	HELT	A6NFD8	242 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	SOCS3	O14543	225 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	CCS	O14618	274 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	TCRB	P04435	133 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	RAB11A	P62491	216 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	OR8G2P	Q6IF36	304 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	SIGLEC15	Q6ZMC9	328 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	ACOT7L	Q6ZUV0	252 aa		13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.51	□□□□□ -0.25
RBM3-206	ENST00000485213	CENPX	A8MT69	81 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	SSSCA1	O60232	199 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	CA1	P00915	261 aa	Predicted RBP	13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	NKX2-1	P43699	371 aa	Predicted RBP	13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	LYZ	P61626	148 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	ARL16	Q0P5N6	197 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	PSMG4	Q5JS54	123 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	TMEM14EP	Q6UXP3	125 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	NARS2	Q96I59	477 aa	Known RBP	13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	SMIM8	Q96KF7	97 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	RAB40C	Q96S21	281 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	NRN1	Q9NPD7	142 aa		13.5	□□□□□ -0.25
RBM3-206	ENST00000485213	TRAV6	A0A075B6T7	132 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	IFITM3	Q01628	133 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	IAH1	Q2TAA2	248 aa	Predicted RBP	13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	ACTL10	Q5JWF8	245 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	CSNK1G2-AS1	Q8NCQ2	148 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	GATAD1	Q8WUU5	269 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	CCDC32	Q9BV29	185 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	C11orf1	Q9H5F2	150 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	PSENEN	Q9NZ42	101 aa		13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	STRAP	Q9Y3F4	350 aa	Known RBP	13.49	□□□□□ -0.25
RBM3-206	ENST00000485213	MBP	P02686	304 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	PMS2P11	Q13670	270 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	GDF5OS	Q5U4N7	250 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	STH	Q8IWL8	128 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	OR11H2	Q8NH07	326 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	RARRES2	Q99969	163 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	NUDT15	Q9NV35	164 aa		13.48	□□□□□ -0.25
RBM3-206	ENST00000485213	DEFB4A	O15263	64 aa		13.47	□□□□□ -0.25
RBM3-206	ENST00000485213	IFNA21	P01568	189 aa		13.47	□□□□□ -0.25
RBM3-206	ENST00000485213	ATF4	P18848	351 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM3-206	ENST00000485213	AP2S1	P53680	142 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM3-206	ENST00000485213	SNRPGP15	A8MWD9	76 aa		13.46	□□□□□ -0.25
RBM3-206	ENST00000485213	METTL15P1	P0C7V9	234 aa		13.46	□□□□□ -0.25
RBM3-206	ENST00000485213	LINC00299	Q6ZSB3	139 aa		13.46	□□□□□ -0.25
RBM3-206	ENST00000485213	TMEM144	Q7Z5S9	345 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms