RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LYRM1O43325 122 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 DEFB131AP59861 70 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 RAB11AP62491 216 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 ID3Q02535 119 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 ZNF90Q03938 601 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 LEMD1Q68G75 181 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 RNF183Q96D59 192 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 SLC35E1Q96K37 410 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 CIB3Q96Q77 187 aaPredicted RBP9.5□□□□□ -0.89
HDAC1-209ENST00000484305 TP53TG1Q9Y2A0 90 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
HDAC1-209ENST00000484305 ZFP92A6NM28 416 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 BUB3O43684 328 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 RNF125Q96EQ8 232 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
HDAC1-209ENST00000484305 IGKV1OR2-108A0A075B7D4 117 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 HELTA6NFD8 242 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 H3BP45 60 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 IFNA21P01568 189 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 POLR2GP62487 172 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC1-209ENST00000484305 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
HDAC1-209ENST00000484305 SPANXN5Q5MJ07 72 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 IL17DQ8TAD2 202 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 PBDC1Q9BVG4 233 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 C20orf85Q9H1P6 137 aa9.48□□□□□ -0.89
HDAC1-209ENST00000484305 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 TCRBP04435 133 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
HDAC1-209ENST00000484305 EIF2B2P49770 351 aaKnown RBP9.47□□□□□ -0.89
HDAC1-209ENST00000484305 AP2S1P53680 142 aaPredicted RBP9.47□□□□□ -0.89
HDAC1-209ENST00000484305 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC1-209ENST00000484305 OR2F1Q13607 317 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 CNPY1Q3B7I2 92 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 TRGV9Q99603 122 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 CCDC32Q9BV29 185 aa9.47□□□□□ -0.89
HDAC1-209ENST00000484305 STRAPQ9Y3F4 350 aaKnown RBP9.47□□□□□ -0.89
HDAC1-209ENST00000484305 TRAV6A0A075B6T7 132 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 SSSCA1O60232 199 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 LYZP61626 148 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 IAH1Q2TAA2 248 aaPredicted RBP9.46□□□□□ -0.9
HDAC1-209ENST00000484305 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 MITD1Q8WV92 249 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
HDAC1-209ENST00000484305 A6NHS1 94 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 SNRPGP15A8MWD9 76 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 CA1P00915 261 aaPredicted RBP9.45□□□□□ -0.9
HDAC1-209ENST00000484305 FABP1P07148 127 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 PAX9P55771 341 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 OR8G2PQ6IF36 304 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 LINC00299Q6ZSB3 139 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 TRPT1Q86TN4 253 aaKnown RBP9.45□□□□□ -0.9
HDAC1-209ENST00000484305 STHQ8IWL8 128 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 SMIM8Q96KF7 97 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 NRN1Q9NPD7 142 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 NUDT15Q9NV35 164 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 GSKIPQ9P0R6 139 aa9.45□□□□□ -0.9
HDAC1-209ENST00000484305 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
HDAC1-209ENST00000484305 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 CCSO14618 274 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 CCNKO75909 580 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 SCGB1D2O95969 90 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 PSMG4Q5JS54 123 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 ACOT7LQ6ZUV0 252 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 ZBTB8BQ8NAP8 495 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-209ENST00000484305 GATAD1Q8WUU5 269 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
HDAC1-209ENST00000484305 LCE6AA0A183 80 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-209ENST00000484305 GATA2P23769 480 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-209ENST00000484305 NUP62P37198 522 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-209ENST00000484305 AKR1C1Q04828 323 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 TMEM182Q6ZP80 229 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-209ENST00000484305 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 S100ZQ8WXG8 99 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 RAB40CQ96S21 281 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 RARRES2Q99969 163 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 PFDN2Q9UHV9 154 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 TBC1D24Q9ULP9 559 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 RCL1Q9Y2P8 373 aaKnown RBP9.43□□□□□ -0.9
HDAC1-209ENST00000484305 LYSTQ99698 3801 aa9.43□□□□□ -0.9
HDAC1-209ENST00000484305 SMCO3A2RU48 225 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 MBPP02686 304 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-209ENST00000484305 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 METTL15P1P0C7V9 234 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 SNRPD3P62318 126 aaKnown RBP9.42□□□□□ -0.9
HDAC1-209ENST00000484305 C1orf194Q5T5A4 169 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 GSG1LQ6UXU4 331 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
HDAC1-209ENST00000484305 ZNF431Q8TF32 576 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms