RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DEFA3P59666 94 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 C16orf54Q6UWD8 224 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 DCANP1Q8TF63 244 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 GLMPQ8WWB7 406 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 CSTL1Q9H114 145 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 TBC1D24Q9ULP9 559 aa15.99■□□□□ 0.15
LIME1-203ENST00000465591 IGKV1D-37A0A075B6S9 117 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 RD3LP0DJH9 198 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 PSG1P11464 419 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 GAMTQ14353 236 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 GGNBP1Q5YKI7 109 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 MAGT1Q9H0U3 335 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 TMED3Q9Y3Q3 217 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 ALMS1Q8TCU4 4167 aa15.98■□□□□ 0.15
LIME1-203ENST00000465591 HYDINQ4G0P3 5121 aa15.97■□□□□ 0.15
LIME1-203ENST00000465591 C9orf170A2RU37 121 aa15.97■□□□□ 0.15
LIME1-203ENST00000465591 MPTX1A8MV57 137 aa15.97■□□□□ 0.15
LIME1-203ENST00000465591 TCRBP04435 133 aa15.97■□□□□ 0.15
LIME1-203ENST00000465591 IFITM3Q01628 133 aa15.97■□□□□ 0.15
LIME1-203ENST00000465591 NARS2Q96I59 477 aaKnown RBP15.97■□□□□ 0.15
LIME1-203ENST00000465591 FAM90A26D6RGX4 464 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 ADAP1O75689 374 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 ZNF688P0C7X2 276 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 GPX4P36969 197 aaPredicted RBP15.96■□□□□ 0.15
LIME1-203ENST00000465591 ATP5IP56385 69 aaPredicted RBP15.96■□□□□ 0.15
LIME1-203ENST00000465591 ZNF90Q03938 601 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 OR51G1Q8NGK1 321 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 ENKURQ8TC29 256 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 GRAMD2BQ96HH9 432 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 C20orf85Q9H1P6 137 aa15.96■□□□□ 0.15
LIME1-203ENST00000465591 C4orf46Q504U0 113 aa15.95■□□□□ 0.14
LIME1-203ENST00000465591 KNCNA6PVL3 124 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 BUB3O43684 328 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 OR4E1P0C645 316 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 RNF125Q96EQ8 232 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 SLC35E1Q96K37 410 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 NUDT15Q9NV35 164 aa15.94■□□□□ 0.14
LIME1-203ENST00000465591 PAIP2BQ9ULR5 123 aaKnown RBP15.94■□□□□ 0.14
LIME1-203ENST00000465591 TRAV6A0A075B6T7 132 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 IGKV1OR2-108A0A075B7D4 117 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 HELTA6NFD8 242 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 ZFP92A6NM28 416 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 PRSS46E5RG02 174 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 WRBO00258 174 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 SYNGR2O43760 224 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 CA1P00915 261 aaPredicted RBP15.93■□□□□ 0.14
LIME1-203ENST00000465591 GIG44P09565 113 aaPredicted RBP15.93■□□□□ 0.14
LIME1-203ENST00000465591 H2AFB2P0C5Z0 115 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 ANXA7P20073 488 aaKnown RBP15.93■□□□□ 0.14
LIME1-203ENST00000465591 DHRS2Q13268 280 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 PMS2P11Q13670 270 aa15.93■□□□□ 0.14
LIME1-203ENST00000465591 MED6O75586 246 aa15.92■□□□□ 0.14
LIME1-203ENST00000465591 RAB11AP62491 216 aa15.92■□□□□ 0.14
LIME1-203ENST00000465591 TRPT1Q86TN4 253 aaKnown RBP15.92■□□□□ 0.14
LIME1-203ENST00000465591 COQ8AQ8NI60 647 aa15.92■□□□□ 0.14
LIME1-203ENST00000465591 PBDC1Q9BVG4 233 aa15.92■□□□□ 0.14
LIME1-203ENST00000465591 H3BP45 60 aa15.91■□□□□ 0.14
LIME1-203ENST00000465591 OR2F1Q13607 317 aa15.91■□□□□ 0.14
LIME1-203ENST00000465591 STHQ8IWL8 128 aa15.91■□□□□ 0.14
LIME1-203ENST00000465591 GATAD1Q8WUU5 269 aa15.91■□□□□ 0.14
LIME1-203ENST00000465591 RARRES2Q99969 163 aa15.91■□□□□ 0.14
LIME1-203ENST00000465591 EIF2B2P49770 351 aaKnown RBP15.9■□□□□ 0.14
LIME1-203ENST00000465591 ID3Q02535 119 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 SIGLEC15Q6ZMC9 328 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 NRARPQ7Z6K4 114 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 THAP8Q8NA92 274 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 OR11H2Q8NH07 326 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 CIB3Q96Q77 187 aaPredicted RBP15.9■□□□□ 0.14
LIME1-203ENST00000465591 TRGV9Q99603 122 aa15.9■□□□□ 0.14
LIME1-203ENST00000465591 CXorf65A6NEN9 183 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 C4BPBP20851 252 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 AP2S1P53680 142 aaPredicted RBP15.89■□□□□ 0.13
LIME1-203ENST00000465591 LYZP61626 148 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 POLR2GP62487 172 aaKnown RBP eCLIP15.89■□□□□ 0.13
LIME1-203ENST00000465591 PSMG4Q5JS54 123 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 ACTL10Q5JWF8 245 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 SPANXN5Q5MJ07 72 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 GSG1LQ6UXU4 331 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 OR4D5Q8NGN0 318 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 NRN1Q9NPD7 142 aa15.89■□□□□ 0.13
LIME1-203ENST00000465591 ATF4P18848 351 aaPredicted RBP15.88■□□□□ 0.13
LIME1-203ENST00000465591 OR8G2PQ6IF36 304 aa15.88■□□□□ 0.13
LIME1-203ENST00000465591 RAB40CQ96S21 281 aa15.88■□□□□ 0.13
LIME1-203ENST00000465591 TMEM182Q6ZP80 229 aaPredicted RBP15.87■□□□□ 0.13
LIME1-203ENST00000465591 DEFB4AO15263 64 aa15.86■□□□□ 0.13
LIME1-203ENST00000465591 JTBO76095 146 aa15.86■□□□□ 0.13
LIME1-203ENST00000465591 IFNA21P01568 189 aa15.86■□□□□ 0.13
LIME1-203ENST00000465591 MITD1Q8WV92 249 aa15.86■□□□□ 0.13
LIME1-203ENST00000465591 SNRPGP15A8MWD9 76 aa15.85■□□□□ 0.13
LIME1-203ENST00000465591 CCNKO75909 580 aa15.85■□□□□ 0.13
LIME1-203ENST00000465591 IL5P05113 134 aa15.85■□□□□ 0.13
LIME1-203ENST00000465591 GATA2P23769 480 aaPredicted RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 NKX2-1P43699 371 aaPredicted RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 DEFB1P60022 68 aa15.85■□□□□ 0.13
LIME1-203ENST00000465591 RPP30P78346 268 aaKnown RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 ACOT7LQ6ZUV0 252 aa15.85■□□□□ 0.13
LIME1-203ENST00000465591 ZNF431Q8TF32 576 aaPredicted RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 GPN1Q9HCN4 374 aaPredicted RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 STRAPQ9Y3F4 350 aaKnown RBP15.85■□□□□ 0.13
LIME1-203ENST00000465591 PMS2P5A8MQ11 134 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms