RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 ANXA3P12429 323 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 FAUP35544 74 aaKnown RBP8.67□□□□□ -1.02
PDGFB-204ENST00000455790 ZNF90Q03938 601 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 GAMTQ14353 236 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
PDGFB-204ENST00000455790 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 TOMM5Q8N4H5 51 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 RPP25LQ8N5L8 163 aaKnown RBP8.67□□□□□ -1.02
PDGFB-204ENST00000455790 RBM38Q9H0Z9 239 aaKnown RBP8.67□□□□□ -1.02
PDGFB-204ENST00000455790 CACFD1Q9UGQ2 172 aa8.67□□□□□ -1.02
PDGFB-204ENST00000455790 CCDC160A6NGH7 325 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 DEDDO75618 318 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 SPP1P10451 314 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 VAMP1P23763 118 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 EIF2B2P49770 351 aaKnown RBP8.66□□□□□ -1.02
PDGFB-204ENST00000455790 AP3S2P59780 193 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 DEFB1P60022 68 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 TMEM128Q5BJH2 165 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 SIGLEC15Q6ZMC9 328 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 CCDC190Q86UF4 302 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 PBDC1Q9BVG4 233 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 X6R8D5 127 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
PDGFB-204ENST00000455790 ZFP92A6NM28 416 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
PDGFB-204ENST00000455790 LRTM2Q8N967 370 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 SLC35E1Q96K37 410 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 MFFQ9GZY8 342 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 MAGT1Q9H0U3 335 aa8.65□□□□□ -1.02
PDGFB-204ENST00000455790 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
PDGFB-204ENST00000455790 DUXBA0A1W2PPF3 345 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
PDGFB-204ENST00000455790 SFT2D2O95562 160 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
PDGFB-204ENST00000455790 LYZP61626 148 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 OR2F1Q13607 317 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
PDGFB-204ENST00000455790 SRRQ9GZT4 340 aa8.64□□□□□ -1.03
PDGFB-204ENST00000455790 PAIP2BQ9ULR5 123 aaKnown RBP8.64□□□□□ -1.03
PDGFB-204ENST00000455790 DNAH10Q8IVF4 4471 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 H3BMM0 161 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 HOXB5P09067 269 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 S100A5P33763 92 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 AP2S1P53680 142 aaPredicted RBP8.63□□□□□ -1.03
PDGFB-204ENST00000455790 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
PDGFB-204ENST00000455790 TMEM41BQ5BJD5 291 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 OR8G2PQ6IF36 304 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 CENPSQ8N2Z9 138 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 SLC25A21Q9BQT8 299 aaPredicted RBP8.63□□□□□ -1.03
PDGFB-204ENST00000455790 TBC1D24Q9ULP9 559 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
PDGFB-204ENST00000455790 H3BP45 60 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 WRBO00258 174 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 SOCS3O14543 225 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 SLC25A6P12236 298 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 HLA-DRB4P13762 266 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 MIFP14174 115 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 HLA-DMBP28068 263 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 ATP5IP56385 69 aaPredicted RBP8.62□□□□□ -1.03
PDGFB-204ENST00000455790 PRR20EP86478 221 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 PRR20CP86479 221 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 PRR20DP86480 221 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 PRR20BP86481 221 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 PRR20AP86496 221 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 BAK1Q16611 211 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 LGALS9CQ6DKI2 356 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 Q6ZTC4 211 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 TRGV9Q99603 122 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 HRH4Q9H3N8 390 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 HLA-DRB4X5D2U9 266 aa8.62□□□□□ -1.03
PDGFB-204ENST00000455790 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 SYNGR2O43760 224 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 ADAP1O75689 374 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 IGKV3-20P01619 116 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 FXYD7P58549 80 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 RAB11AP62491 216 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 ZNF767PQ75MW2 155 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 C2CD4CQ8TF44 421 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 DEDD2Q8WXF8 326 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
PDGFB-204ENST00000455790 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
PDGFB-204ENST00000455790 FLVCR2Q9UPI3 526 aa8.61□□□□□ -1.03
PDGFB-204ENST00000455790 PIGBOS1A0A0B4J2F0 54 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 IGLL5B9A064 214 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 MED6O75586 246 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 GATA2P23769 480 aaPredicted RBP8.6□□□□□ -1.03
PDGFB-204ENST00000455790 NUP62P37198 522 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms