RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 ARID1AO14497 2285 aa11.54□□□□□ -0.56
RAPGEF3-205ENST00000449771 SRRM5B3KS81 715 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 EFNA2O43921 213 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 DICER1Q9UPY3 1922 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 PDCD11Q14690 1871 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 FXYD7P58549 80 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
RAPGEF3-205ENST00000449771 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 RNF182Q8N6D2 247 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 C3orf56Q8N813 242 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 GHRHP01286 108 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 NPSP0C0P6 89 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 PAX2Q02962 417 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 EFNB3Q15768 340 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 C10orf55Q5SWW7 151 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 CRIM1Q9NZV1 1036 aa11.52□□□□□ -0.56
RAPGEF3-205ENST00000449771 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 PRR32B1ATL7 298 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 SLC25A16P16260 332 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 LCNL1Q6ZST4 164 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 MDS2Q8NDY4 140 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 NABP1Q96AH0 204 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 M0R1W7 72 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 PSCAO43653 123 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 SEC11AP67812 179 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE2EQ4V326 116 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 SSC4DQ8WTU2 575 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
RAPGEF3-205ENST00000449771 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 F8VVB4 439 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 F8VWA3 439 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 C1QTNF9P0C862 333 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 OCIAD2Q56VL3 154 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 COQ2Q96H96 371 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 A0A087WX48 190 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGKV1-12A0A0C4DH73 117 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 A8MWP6 167 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGKV1D-12P01611 117 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 SRSF4Q08170 494 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 FBLN5Q9UBX5 448 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 SCN8AQ9UQD0 1980 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 A0A1W2PRE2 83 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 RSPO3Q9BXY4 272 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 TRBV7-1A0A0A6YYK4 115 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGHV4-39P01824 125 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 NDPQ00604 133 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 TEX38Q6PEX7 206 aa11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 PHLDA1Q8WV24 401 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-205ENST00000449771 TRGV1A0A0A0MS02 117 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 NPIPB5A8MRT5 1133 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE13Q4V321 117 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 F2Z2F3 143 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGHV3-53P01767 116 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 CD5P06127 495 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAFA1Q96PS6 74 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGKV1D-8A0A087WSZ0 117 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 COL8A2P25067 703 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 RNF126Q9BV68 326 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
RAPGEF3-205ENST00000449771 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 GAGE12BA1L429 117 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 SLC25A48Q6ZT89 311 aaKnown RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 HBDP02042 147 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 RNF114Q9Y508 228 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 LINC00158P58513 81 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 BPESC1Q9GZL8 116 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 NEUROG3Q9Y4Z2 214 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
RAPGEF3-205ENST00000449771 C17orf82Q86X59 251 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms